RNA id: TCONS_00026525


Basic Information

Item Value
RNA id TCONS_00026525
length 661
RNA type processed_transcript
GC content 0.46
exon number 4
gene id XLOC_013435
representative False

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 24273428 ~ 24476910 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GATAAGGTGTTTGTTTCGTTATCTGTTTAGATGACCTCACACTTATCTTGGGTCAGCCTCCATCCCACCTTGAGGGTGTTCAACTGAAGAGATTCTCCTGTCCCTGCTGAAGTGTCTTCTCTTTATCACCACCCAATGGACATATTTGAATCAATGGCAGACGGGTCCTCTAAACCCACTCCAACTTCTGTCTTTCTTGCAGCCCACTTGGGATCTGGAGAGTAATACACCCAAGACTAAATCCGCTGATATTCTCGCTGTGTTTGAAGCTTGGGTTGAATACTCACAGGCTGCATAATGAGCAGGTCTGGCCTTGAGAGTAGCAGAGCAGCAGGCAGGCAAGAGGGCTTGTGCAGAGAGGAGACCAGAGAGGCAGTAAAAGTCAGCAGTGGTAACCTTGTCCGCCCATGGTCACGGGTCATTTGGCAAGCGCGCTACAGAATTCATTTCACTAAGAAGGAGAGAATGCGAAAGGAGAGTGAACGAGAGGAAATAGGAGGCGACTGAGAGGGACATTGATGGAGGAAGAAGGCGATGATAAATTTGAATAGAAACAATTGTTCGGTTACAACAGCCTGATGTCTCTTTTTAGCATTGTGATCAATACAAATGCTGGCATTCAGCTGTTATATGATCATTTTGTAGCACTTTCTGATGGATT

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-126 No description available

Ensembl:

ensembl_id ENSDART00000135628

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00027318 lncRNA downstream 189592 24047486 ~ 24083836 (-) True XLOC_013434
TCONS_00027317 lncRNA downstream 194184 24047486 ~ 24079244 (-) False XLOC_013434
TCONS_00027316 lncRNA downstream 250167 23933175 ~ 24023261 (-) True XLOC_013432
TCONS_00027314 lncRNA downstream 388774 23877479 ~ 23884654 (-) False XLOC_013433
TCONS_00027315 lncRNA downstream 388818 23881809 ~ 23884610 (-) True XLOC_013433
TCONS_00027331 lncRNA upstream 21510 24497624 ~ 24507208 (-) False XLOC_013437
TCONS_00027332 lncRNA upstream 21510 24497624 ~ 24537349 (-) False XLOC_013437
TCONS_00027334 lncRNA upstream 21510 24497624 ~ 24537463 (-) False XLOC_013437
TCONS_00027333 lncRNA upstream 21510 24497624 ~ 24537463 (-) False XLOC_013437
TCONS_00027335 lncRNA upstream 21510 24497624 ~ 24542318 (-) False XLOC_013437
TCONS_00026521 mRNA downstream 398058 23868650 ~ 23875370 (-) False XLOC_013432
TCONS_00026522 mRNA downstream 398209 23870402 ~ 23875219 (-) False XLOC_013432
TCONS_00026524 mRNA downstream 398499 23873455 ~ 23874929 (-) False XLOC_013432
TCONS_00026514 mRNA downstream 1519791 22739732 ~ 22753637 (-) False XLOC_013426
TCONS_00026515 mRNA downstream 1519791 22746506 ~ 22753637 (-) True XLOC_013426
TCONS_00026532 mRNA upstream 457359 24933473 ~ 24989580 (-) False XLOC_013440
TCONS_00026533 mRNA upstream 462578 24938692 ~ 24988661 (-) False XLOC_013440
TCONS_00026534 mRNA upstream 504770 24980884 ~ 24988645 (-) True XLOC_013440
TCONS_00026538 mRNA upstream 519905 24996019 ~ 24996634 (-) True XLOC_013441
TCONS_00026539 mRNA upstream 551381 25027495 ~ 25051846 (-) True XLOC_013442
TCONS_00026523 other downstream 250415 23873344 ~ 24023013 (-) False XLOC_013432
TCONS_00026516 other downstream 1410961 22859479 ~ 22862467 (-) True XLOC_013427
TCONS_00026513 other downstream 1530062 22739732 ~ 22743366 (-) False XLOC_013426
TCONS_00026504 other downstream 1721172 22550595 ~ 22552256 (-) False XLOC_013420
TCONS_00026501 other downstream 2189542 22083772 ~ 22083886 (-) True XLOC_013417
TCONS_00026529 other upstream 84073 24560187 ~ 24560397 (-) True XLOC_013437
TCONS_00026536 other upstream 514154 24990268 ~ 24996647 (-) False XLOC_013441
TCONS_00026541 other upstream 682547 25158661 ~ 25158777 (-) True XLOC_013444
TCONS_00026548 other upstream 1039779 25515893 ~ 25516631 (-) True XLOC_013448
TCONS_00026554 other upstream 1278724 25754838 ~ 25758277 (-) False XLOC_013451