Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU44702 |
| length | 311 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G39575 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 37199485 ~ 37202357 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU44699 | lncRNA | downstream | 2049 | 37197158 ~ 37197436 (-) | True | G39572 |
| TU44621 | lncRNA | downstream | 2837 | 37089224 ~ 37196648 (-) | False | G39502 |
| TU44623 | lncRNA | downstream | 2837 | 37129527 ~ 37196648 (-) | False | G39502 |
| TU44620 | lncRNA | downstream | 2837 | 37170978 ~ 37196648 (-) | False | G39502 |
| TU44618 | lncRNA | downstream | 2946 | 37077411 ~ 37196539 (-) | False | G39502 |
| TU44745 | lncRNA | upstream | 73105 | 37275462 ~ 37275700 (-) | True | G39618 |
| TU44836 | lncRNA | upstream | 206845 | 37409202 ~ 37409826 (-) | True | G39706 |
| TU44841 | lncRNA | upstream | 216805 | 37419162 ~ 37419471 (-) | True | G39711 |
| TU44904 | lncRNA | upstream | 268957 | 37471314 ~ 37471527 (-) | True | G39773 |
| TU44943 | lncRNA | upstream | 296491 | 37498848 ~ 37499276 (-) | True | G39812 |
| XM_021600613.2 | mRNA | downstream | 167832 | 37028885 ~ 37031653 (-) | True | LOC110522309 |
| XM_021600592.2 | mRNA | downstream | 246514 | 36884472 ~ 36952971 (-) | False | trim44 |
| XM_021600572.2 | mRNA | downstream | 246515 | 36884472 ~ 36952970 (-) | False | trim44 |
| XM_021600563.2 | mRNA | downstream | 246516 | 36884472 ~ 36952969 (-) | False | trim44 |
| XM_021600601.2 | mRNA | downstream | 246517 | 36884472 ~ 36952968 (-) | False | trim44 |
| XM_021600657.2 | mRNA | upstream | 10063 | 37212420 ~ 37248824 (-) | True | LOC110522333 |
| XM_036977062.1 | mRNA | upstream | 85199 | 37287556 ~ 37342075 (-) | False | pdhx |
| XM_021600666.2 | mRNA | upstream | 85199 | 37287556 ~ 37347643 (-) | False | pdhx |
| XM_021600676.2 | mRNA | upstream | 85199 | 37287556 ~ 37347643 (-) | True | pdhx |
| XM_021600689.2 | mRNA | upstream | 178211 | 37380568 ~ 37397634 (-) | False | LOC110522348 |
| TU43930 | other | downstream | 688656 | 36508538 ~ 36510829 (-) | True | G38855 |
| TU43851 | other | downstream | 790466 | 36370094 ~ 36409019 (-) | True | LOC110522187 |
| TU43028 | other | downstream | 1477429 | 35721440 ~ 35722056 (-) | True | G38045 |
| TU42957 | other | downstream | 1615877 | 35583292 ~ 35583608 (-) | True | G37976 |
| TU42883 | other | downstream | 1758157 | 35440918 ~ 35441328 (-) | True | G37907 |
| TU45214 | other | upstream | 514183 | 37716540 ~ 37717033 (-) | True | G40079 |
| TU45886 | other | upstream | 922923 | 38125280 ~ 38125725 (-) | True | G40732 |
| TU45924 | other | upstream | 985131 | 38187488 ~ 38191736 (-) | True | G40768 |
| TU47067 | other | upstream | 1819448 | 39021805 ~ 39022025 (-) | True | G41868 |
| TU52237 | other | upstream | 5836371 | 43038728 ~ 43129029 (-) | True | tspan9a |
