Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU44989 |
| length | 223 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G39857 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 37533836 ~ 37534058 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU44988 | lncRNA | downstream | 839 | 37532552 ~ 37532997 (-) | True | G39856 |
| TU44981 | lncRNA | downstream | 7433 | 37525861 ~ 37526403 (-) | True | G39849 |
| TU44979 | lncRNA | downstream | 9247 | 37524369 ~ 37524589 (-) | True | G39847 |
| TU44977 | lncRNA | downstream | 10119 | 37523458 ~ 37523717 (-) | True | G39845 |
| TU44975 | lncRNA | downstream | 11126 | 37522462 ~ 37522710 (-) | True | G39843 |
| TU45036 | lncRNA | upstream | 37464 | 37571522 ~ 37571860 (-) | True | G39904 |
| TU45180 | lncRNA | upstream | 139597 | 37673655 ~ 37673906 (-) | False | LOC118966683 |
| TU45181 | lncRNA | upstream | 139854 | 37673912 ~ 37674287 (-) | True | LOC118966683 |
| TU45184 | lncRNA | upstream | 151496 | 37685554 ~ 37691937 (-) | True | G40049 |
| TU45198 | lncRNA | upstream | 169721 | 37703779 ~ 37704012 (-) | True | G40063 |
| XM_021600689.2 | mRNA | downstream | 136202 | 37380568 ~ 37397634 (-) | False | LOC110522348 |
| XM_021600697.2 | mRNA | downstream | 136202 | 37380568 ~ 37397634 (-) | True | LOC110522348 |
| XM_021600666.2 | mRNA | downstream | 186193 | 37287556 ~ 37347643 (-) | False | pdhx |
| XM_021600676.2 | mRNA | downstream | 186193 | 37287556 ~ 37347643 (-) | True | pdhx |
| XM_036977062.1 | mRNA | downstream | 191761 | 37287556 ~ 37342075 (-) | False | pdhx |
| XM_036989487.1 | mRNA | upstream | 136791 | 37670849 ~ 37675533 (-) | False | LOC118966683 |
| XM_036989498.1 | mRNA | upstream | 142323 | 37676381 ~ 37681639 (-) | True | LOC118966685 |
| XM_036989509.1 | mRNA | upstream | 148586 | 37682644 ~ 37687745 (-) | True | LOC118966688 |
| XM_036989519.1 | mRNA | upstream | 154692 | 37688750 ~ 37693851 (-) | True | LOC118966689 |
| XR_005051686.1 | mRNA | upstream | 527031 | 38061089 ~ 38061663 (-) | True | LOC118964577 |
| TU43930 | other | downstream | 1023007 | 36508538 ~ 36510829 (-) | True | G38855 |
| TU43851 | other | downstream | 1124817 | 36370094 ~ 36409019 (-) | True | LOC110522187 |
| TU43028 | other | downstream | 1811780 | 35721440 ~ 35722056 (-) | True | G38045 |
| TU42957 | other | downstream | 1950228 | 35583292 ~ 35583608 (-) | True | G37976 |
| TU42883 | other | downstream | 2092508 | 35440918 ~ 35441328 (-) | True | G37907 |
| TU45214 | other | upstream | 182482 | 37716540 ~ 37717033 (-) | True | G40079 |
| TU45886 | other | upstream | 591222 | 38125280 ~ 38125725 (-) | True | G40732 |
| TU45924 | other | upstream | 653430 | 38187488 ~ 38191736 (-) | True | G40768 |
| TU47067 | other | upstream | 1487747 | 39021805 ~ 39022025 (-) | True | G41868 |
| TU52237 | other | upstream | 5504670 | 43038728 ~ 43129029 (-) | True | tspan9a |
