Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU45944 |
| length | 333 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G40788 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 38220447 ~ 38220779 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU45932 | lncRNA | downstream | 17377 | 38202813 ~ 38203070 (-) | True | G40776 |
| TU45927 | lncRNA | downstream | 23769 | 38196440 ~ 38196678 (-) | True | G40771 |
| TU45923 | lncRNA | downstream | 25117 | 38194205 ~ 38195330 (-) | True | G40767 |
| TU45926 | lncRNA | downstream | 27376 | 38192662 ~ 38193071 (-) | True | G40770 |
| TU45925 | lncRNA | downstream | 28080 | 38192100 ~ 38192367 (-) | True | G40769 |
| TU45945 | lncRNA | upstream | 624 | 38221403 ~ 38221646 (-) | True | G40789 |
| TU45963 | lncRNA | upstream | 14967 | 38235746 ~ 38236020 (-) | True | G40804 |
| TU45994 | lncRNA | upstream | 41438 | 38262217 ~ 38262466 (-) | True | G40835 |
| TU46002 | lncRNA | upstream | 44625 | 38265404 ~ 38265613 (-) | True | G40843 |
| TU46179 | lncRNA | upstream | 172867 | 38393646 ~ 38393901 (-) | True | G41003 |
| XR_005051684.1 | mRNA | downstream | 153842 | 38065959 ~ 38066605 (-) | False | LOC118964575 |
| XR_005051686.1 | mRNA | downstream | 158784 | 38061089 ~ 38061663 (-) | True | LOC118964577 |
| XM_036989519.1 | mRNA | downstream | 526596 | 37688750 ~ 37693851 (-) | True | LOC118966689 |
| XM_036989509.1 | mRNA | downstream | 532702 | 37682644 ~ 37687745 (-) | True | LOC118966688 |
| XM_036989498.1 | mRNA | downstream | 538808 | 37676381 ~ 37681639 (-) | True | LOC118966685 |
| LOC110520456 | mRNA | upstream | 794296 | 39015075 ~ 39019091 (-) | True | LOC110520456 |
| XM_021600757.2 | mRNA | upstream | 860224 | 39081003 ~ 39084318 (-) | True | LOC110522389 |
| LOC118966691 | mRNA | upstream | 880046 | 39100825 ~ 39115097 (-) | True | LOC118966691 |
| XM_036977133.1 | mRNA | upstream | 1094273 | 39315052 ~ 39336321 (-) | False | man2a2 |
| XM_036977115.1 | mRNA | upstream | 1094273 | 39315052 ~ 39336324 (-) | False | man2a2 |
| TU45924 | other | downstream | 28711 | 38187488 ~ 38191736 (-) | True | G40768 |
| TU45886 | other | downstream | 94722 | 38125280 ~ 38125725 (-) | True | G40732 |
| TU45214 | other | downstream | 503414 | 37716540 ~ 37717033 (-) | True | G40079 |
| TU43930 | other | downstream | 1709618 | 36508538 ~ 36510829 (-) | True | G38855 |
| TU43851 | other | downstream | 1811428 | 36370094 ~ 36409019 (-) | True | LOC110522187 |
| TU47067 | other | upstream | 801026 | 39021805 ~ 39022025 (-) | True | G41868 |
| TU52237 | other | upstream | 4817949 | 43038728 ~ 43129029 (-) | True | tspan9a |
| TU55610 | other | upstream | 7500026 | 45720805 ~ 45721124 (-) | True | G49774 |
| TU55801 | other | upstream | 7728179 | 45948958 ~ 45949951 (-) | True | G49962 |
| TU57229 | other | upstream | 8843995 | 47064774 ~ 47119033 (-) | False | G51214 |
