Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU46002 |
| length | 210 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G40843 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 38265404 ~ 38265613 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU45994 | lncRNA | downstream | 2938 | 38262217 ~ 38262466 (-) | True | G40835 |
| TU45963 | lncRNA | downstream | 29384 | 38235746 ~ 38236020 (-) | True | G40804 |
| TU45945 | lncRNA | downstream | 43758 | 38221403 ~ 38221646 (-) | True | G40789 |
| TU45944 | lncRNA | downstream | 44625 | 38220447 ~ 38220779 (-) | True | G40788 |
| TU45932 | lncRNA | downstream | 62334 | 38202813 ~ 38203070 (-) | True | G40776 |
| TU46179 | lncRNA | upstream | 128033 | 38393646 ~ 38393901 (-) | True | G41003 |
| TU46206 | lncRNA | upstream | 145801 | 38411414 ~ 38411626 (-) | True | G41030 |
| TU46413 | lncRNA | upstream | 289582 | 38555195 ~ 38555573 (-) | True | G41227 |
| TU46414 | lncRNA | upstream | 291018 | 38556631 ~ 38556915 (-) | True | G41228 |
| TU46445 | lncRNA | upstream | 309479 | 38575092 ~ 38575316 (-) | True | G41259 |
| XR_005051684.1 | mRNA | downstream | 198799 | 38065959 ~ 38066605 (-) | False | LOC118964575 |
| XR_005051686.1 | mRNA | downstream | 203741 | 38061089 ~ 38061663 (-) | True | LOC118964577 |
| XM_036989519.1 | mRNA | downstream | 571553 | 37688750 ~ 37693851 (-) | True | LOC118966689 |
| XM_036989509.1 | mRNA | downstream | 577659 | 37682644 ~ 37687745 (-) | True | LOC118966688 |
| XM_036989498.1 | mRNA | downstream | 583765 | 37676381 ~ 37681639 (-) | True | LOC118966685 |
| LOC110520456 | mRNA | upstream | 749462 | 39015075 ~ 39019091 (-) | True | LOC110520456 |
| XM_021600757.2 | mRNA | upstream | 815390 | 39081003 ~ 39084318 (-) | True | LOC110522389 |
| LOC118966691 | mRNA | upstream | 835212 | 39100825 ~ 39115097 (-) | True | LOC118966691 |
| XM_036977133.1 | mRNA | upstream | 1049439 | 39315052 ~ 39336321 (-) | False | man2a2 |
| XM_036977115.1 | mRNA | upstream | 1049439 | 39315052 ~ 39336324 (-) | False | man2a2 |
| TU45924 | other | downstream | 73668 | 38187488 ~ 38191736 (-) | True | G40768 |
| TU45886 | other | downstream | 139679 | 38125280 ~ 38125725 (-) | True | G40732 |
| TU45214 | other | downstream | 548371 | 37716540 ~ 37717033 (-) | True | G40079 |
| TU43930 | other | downstream | 1754575 | 36508538 ~ 36510829 (-) | True | G38855 |
| TU43851 | other | downstream | 1856385 | 36370094 ~ 36409019 (-) | True | LOC110522187 |
| TU47067 | other | upstream | 756192 | 39021805 ~ 39022025 (-) | True | G41868 |
| TU52237 | other | upstream | 4773115 | 43038728 ~ 43129029 (-) | True | tspan9a |
| TU55610 | other | upstream | 7455192 | 45720805 ~ 45721124 (-) | True | G49774 |
| TU55801 | other | upstream | 7683345 | 45948958 ~ 45949951 (-) | True | G49962 |
| TU57229 | other | upstream | 8799161 | 47064774 ~ 47119033 (-) | False | G51214 |
