RNA id: TCONS_00026581


Basic Information

Item Value
RNA id TCONS_00026581
length 118
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_013468
representative True

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 27136865 ~ 27136982 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ggccacagccatatcacactgcggCCAAgatcggttactcactgaagataagcagggttgagcctggtcagtacctgaatgggagacaacatggggaaaaactaggttgctgttggat

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000116087

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00027348 lncRNA downstream 70515 27054846 ~ 27066350 (-) True XLOC_013467
TCONS_00027347 lncRNA downstream 837022 26296165 ~ 26299843 (-) True XLOC_013456
TCONS_00026564 lncRNA downstream 837089 26296165 ~ 26299776 (-) False XLOC_013456
TCONS_00026556 lncRNA downstream 1374527 25760060 ~ 25762338 (-) True XLOC_013451
TCONS_00027346 lncRNA downstream 1391244 25697275 ~ 25745621 (-) True XLOC_013450
TCONS_00027349 lncRNA upstream 221346 27358328 ~ 27362251 (-) True XLOC_013472
TCONS_00027350 lncRNA upstream 544319 27681301 ~ 27682853 (-) True XLOC_013474
TCONS_00027351 lncRNA upstream 665569 27802551 ~ 27819952 (-) False XLOC_013475
TCONS_00027352 lncRNA upstream 680216 27817198 ~ 27819714 (-) False XLOC_013475
TCONS_00026972 lncRNA upstream 681152 27818134 ~ 27819906 (-) True XLOC_013475
TCONS_00026580 mRNA downstream 158925 26967414 ~ 26977940 (-) True XLOC_013466
TCONS_00026579 mRNA downstream 173392 26930956 ~ 26963473 (-) True XLOC_013465
TCONS_00026576 mRNA downstream 242095 26863149 ~ 26894770 (-) False XLOC_013464
TCONS_00026578 mRNA downstream 242133 26891181 ~ 26894732 (-) True XLOC_013464
TCONS_00026575 mRNA downstream 260306 26863139 ~ 26876559 (-) False XLOC_013464
TCONS_00026583 mRNA upstream 172422 27309404 ~ 27316599 (-) True XLOC_013470
TCONS_00026585 mRNA upstream 453460 27590442 ~ 27628784 (-) True XLOC_013473
TCONS_00026586 mRNA upstream 706794 27843776 ~ 27858123 (-) False XLOC_013476
TCONS_00026587 mRNA upstream 706858 27843840 ~ 27897217 (-) True XLOC_013476
TCONS_00026591 mRNA upstream 1800079 28937061 ~ 28938912 (-) True XLOC_013481
TCONS_00026577 other downstream 242162 26880472 ~ 26894703 (-) False XLOC_013464
TCONS_00026563 other downstream 933476 26203303 ~ 26203389 (-) True XLOC_013455
TCONS_00026560 other downstream 1231267 25855010 ~ 25905598 (-) True XLOC_013452
TCONS_00026554 other downstream 1378588 25754838 ~ 25758277 (-) False XLOC_013451
TCONS_00026548 other downstream 1620234 25515893 ~ 25516631 (-) True XLOC_013448
TCONS_00026582 other upstream 169942 27306924 ~ 27307040 (-) True XLOC_013469
TCONS_00026584 other upstream 197959 27334941 ~ 27335059 (-) True XLOC_013471
TCONS_00026588 other upstream 1183748 28320730 ~ 28324155 (-) True XLOC_013478
TCONS_00026590 other upstream 1658577 28795559 ~ 28795675 (-) True XLOC_013480
TCONS_00026592 other upstream 1948076 29085058 ~ 29085174 (-) True XLOC_013482