RNA id: TCONS_00026582


Basic Information

Item Value
RNA id TCONS_00026582
length 117
RNA type rRNA
GC content 0.52
exon number 1
gene id XLOC_013469
representative True

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 27306924 ~ 27307040 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

agccacagccatatcaccctgcagcccaagactggttacttactgaagctaagcatggctgagcctggtcagtacctggatgggagaccacatgggatgtctaggttgctgttgaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000190020

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00027348 lncRNA downstream 240574 27054846 ~ 27066350 (-) True XLOC_013467
TCONS_00027347 lncRNA downstream 1007081 26296165 ~ 26299843 (-) True XLOC_013456
TCONS_00026564 lncRNA downstream 1007148 26296165 ~ 26299776 (-) False XLOC_013456
TCONS_00026556 lncRNA downstream 1544586 25760060 ~ 25762338 (-) True XLOC_013451
TCONS_00027346 lncRNA downstream 1561303 25697275 ~ 25745621 (-) True XLOC_013450
TCONS_00027349 lncRNA upstream 51288 27358328 ~ 27362251 (-) True XLOC_013472
TCONS_00027350 lncRNA upstream 374261 27681301 ~ 27682853 (-) True XLOC_013474
TCONS_00027351 lncRNA upstream 495511 27802551 ~ 27819952 (-) False XLOC_013475
TCONS_00027352 lncRNA upstream 510158 27817198 ~ 27819714 (-) False XLOC_013475
TCONS_00026972 lncRNA upstream 511094 27818134 ~ 27819906 (-) True XLOC_013475
TCONS_00026580 mRNA downstream 328984 26967414 ~ 26977940 (-) True XLOC_013466
TCONS_00026579 mRNA downstream 343451 26930956 ~ 26963473 (-) True XLOC_013465
TCONS_00026576 mRNA downstream 412154 26863149 ~ 26894770 (-) False XLOC_013464
TCONS_00026578 mRNA downstream 412192 26891181 ~ 26894732 (-) True XLOC_013464
TCONS_00026575 mRNA downstream 430365 26863139 ~ 26876559 (-) False XLOC_013464
TCONS_00026583 mRNA upstream 2364 27309404 ~ 27316599 (-) True XLOC_013470
TCONS_00026585 mRNA upstream 283402 27590442 ~ 27628784 (-) True XLOC_013473
TCONS_00026586 mRNA upstream 536736 27843776 ~ 27858123 (-) False XLOC_013476
TCONS_00026587 mRNA upstream 536800 27843840 ~ 27897217 (-) True XLOC_013476
TCONS_00026591 mRNA upstream 1630021 28937061 ~ 28938912 (-) True XLOC_013481
TCONS_00026581 other downstream 169942 27136865 ~ 27136982 (-) True XLOC_013468
TCONS_00026577 other downstream 412221 26880472 ~ 26894703 (-) False XLOC_013464
TCONS_00026563 other downstream 1103535 26203303 ~ 26203389 (-) True XLOC_013455
TCONS_00026560 other downstream 1401326 25855010 ~ 25905598 (-) True XLOC_013452
TCONS_00026554 other downstream 1548647 25754838 ~ 25758277 (-) False XLOC_013451
TCONS_00026584 other upstream 27901 27334941 ~ 27335059 (-) True XLOC_013471
TCONS_00026588 other upstream 1013690 28320730 ~ 28324155 (-) True XLOC_013478
TCONS_00026590 other upstream 1488519 28795559 ~ 28795675 (-) True XLOC_013480
TCONS_00026592 other upstream 1778018 29085058 ~ 29085174 (-) True XLOC_013482
TCONS_00026593 other upstream 1906093 29213133 ~ 29213249 (-) True XLOC_013483