Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU54626 |
| length | 222 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G48894 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 45062655 ~ 45062876 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU54501 | lncRNA | downstream | 159550 | 44902783 ~ 44903105 (-) | True | G48779 |
| TU54468 | lncRNA | downstream | 202665 | 44859721 ~ 44859990 (-) | True | G48746 |
| TU54460 | lncRNA | downstream | 222101 | 44840228 ~ 44840554 (-) | True | G48738 |
| TU54458 | lncRNA | downstream | 223796 | 44837476 ~ 44838859 (-) | True | G48736 |
| TU54450 | lncRNA | downstream | 233669 | 44828366 ~ 44828986 (-) | True | G48728 |
| TU54639 | lncRNA | upstream | 6548 | 45069424 ~ 45069679 (-) | True | G48907 |
| TU55212 | lncRNA | upstream | 64213 | 45127089 ~ 45142241 (-) | True | LOC110523666 |
| TU55291 | lncRNA | upstream | 135730 | 45198606 ~ 45198941 (-) | True | G49489 |
| TU55312 | lncRNA | upstream | 157791 | 45220667 ~ 45220919 (-) | True | G49510 |
| TU55326 | lncRNA | upstream | 180897 | 45243773 ~ 45243993 (-) | True | G49524 |
| LOC110520774 | mRNA | downstream | 161044 | 44900676 ~ 44901611 (-) | True | LOC110520774 |
| XM_036978241.1 | mRNA | downstream | 227169 | 44821497 ~ 44835486 (-) | True | mmp15a |
| XR_005048468.1 | mRNA | downstream | 245114 | 44816985 ~ 44817541 (-) | True | LOC118960022 |
| XM_021602501.2 | mRNA | downstream | 252275 | 44793384 ~ 44810380 (-) | True | LOC110523630 |
| XM_021602481.2 | mRNA | downstream | 269823 | 44787137 ~ 44792832 (-) | True | lrrc29 |
| XM_021602577.2 | mRNA | upstream | 53027 | 45115903 ~ 45142306 (-) | False | LOC110523666 |
| XM_021602586.2 | mRNA | upstream | 53027 | 45115903 ~ 45142306 (-) | False | LOC110523666 |
| XM_021602595.2 | mRNA | upstream | 53027 | 45115903 ~ 45142306 (-) | False | LOC110523666 |
| XM_036978291.1 | mRNA | upstream | 53027 | 45115903 ~ 45142306 (-) | False | LOC110523666 |
| XM_021602567.2 | mRNA | upstream | 53027 | 45115903 ~ 45142315 (-) | False | LOC110523666 |
| TU52237 | other | downstream | 1933626 | 43038728 ~ 43129029 (-) | True | tspan9a |
| TU47067 | other | downstream | 6040630 | 39021805 ~ 39022025 (-) | True | G41868 |
| TU45924 | other | downstream | 6870919 | 38187488 ~ 38191736 (-) | True | G40768 |
| TU45886 | other | downstream | 6936930 | 38125280 ~ 38125725 (-) | True | G40732 |
| TU45214 | other | downstream | 7345622 | 37716540 ~ 37717033 (-) | True | G40079 |
| TU55610 | other | upstream | 657929 | 45720805 ~ 45721124 (-) | True | G49774 |
| TU55801 | other | upstream | 886082 | 45948958 ~ 45949951 (-) | True | G49962 |
| TU57229 | other | upstream | 2001898 | 47064774 ~ 47119033 (-) | False | G51214 |
| TU57327 | other | upstream | 2226063 | 47288939 ~ 47289681 (-) | True | G51285 |
| TU57725 | other | upstream | 2314765 | 47377641 ~ 47378543 (-) | True | G51649 |
