Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU56784 |
| length | 602 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G50824 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 46350310 ~ 46350911 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU56311 | lncRNA | downstream | 2447 | 46347647 ~ 46347863 (-) | True | G50411 |
| TU56266 | lncRNA | downstream | 71768 | 46278307 ~ 46278542 (-) | True | G50367 |
| TU56265 | lncRNA | downstream | 72499 | 46277576 ~ 46277811 (-) | True | G50366 |
| TU56261 | lncRNA | downstream | 75325 | 46274773 ~ 46274985 (-) | True | G50362 |
| TU56259 | lncRNA | downstream | 76804 | 46273266 ~ 46273506 (-) | True | G50360 |
| TU56790 | lncRNA | upstream | 11725 | 46362636 ~ 46362847 (-) | True | G50830 |
| TU56791 | lncRNA | upstream | 12332 | 46363243 ~ 46363452 (-) | True | G50831 |
| TU56838 | lncRNA | upstream | 83317 | 46434228 ~ 46434495 (-) | True | G50875 |
| TU56846 | lncRNA | upstream | 92760 | 46443671 ~ 46443969 (-) | True | G50883 |
| TU56849 | lncRNA | upstream | 96549 | 46447460 ~ 46447697 (-) | True | G50886 |
| XM_021603103.2 | mRNA | downstream | 253203 | 46085582 ~ 46097107 (-) | True | tcp11l1 |
| XM_021603095.2 | mRNA | downstream | 253204 | 46085582 ~ 46097106 (-) | False | tcp11l1 |
| XM_036978555.1 | mRNA | downstream | 253305 | 46085582 ~ 46097005 (-) | False | tcp11l1 |
| XM_021603074.2 | mRNA | downstream | 273569 | 46025778 ~ 46076741 (-) | True | LOC110523921 |
| XM_021603083.2 | mRNA | downstream | 273579 | 46025778 ~ 46076731 (-) | False | LOC110523921 |
| XM_021603297.2 | mRNA | upstream | 386524 | 46737435 ~ 46743033 (-) | True | LOC110524015 |
| XM_021603330.2 | mRNA | upstream | 466145 | 46817056 ~ 46838556 (-) | False | LOC110524028 |
| XM_021603323.2 | mRNA | upstream | 466145 | 46817056 ~ 46838557 (-) | False | LOC110524028 |
| XM_036978804.1 | mRNA | upstream | 466145 | 46817056 ~ 46839552 (-) | False | LOC110524028 |
| XM_036978815.1 | mRNA | upstream | 466145 | 46817056 ~ 46839553 (-) | True | LOC110524028 |
| TU55801 | other | downstream | 400359 | 45948958 ~ 45949951 (-) | True | G49962 |
| TU55610 | other | downstream | 629186 | 45720805 ~ 45721124 (-) | True | G49774 |
| TU52237 | other | downstream | 3221281 | 43038728 ~ 43129029 (-) | True | tspan9a |
| TU47067 | other | downstream | 7328285 | 39021805 ~ 39022025 (-) | True | G41868 |
| TU45924 | other | downstream | 8158574 | 38187488 ~ 38191736 (-) | True | G40768 |
| TU57229 | other | upstream | 713863 | 47064774 ~ 47119033 (-) | False | G51214 |
| TU57327 | other | upstream | 938028 | 47288939 ~ 47289681 (-) | True | G51285 |
| TU57725 | other | upstream | 1026730 | 47377641 ~ 47378543 (-) | True | G51649 |
| TU57798 | other | upstream | 1191465 | 47542376 ~ 47561209 (-) | True | LOC110524104 |
| TU59011 | other | upstream | 1943197 | 48294108 ~ 48304136 (-) | True | LOC110524264 |
