RNA id: TCONS_00026590



Basic Information


Item Value
RNA id TCONS_00026590
length 117
RNA type rRNA
GC content 0.48
exon number 1
gene id XLOC_013480
representative True

Chromosome Information


Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 28795559 ~ 28795675 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GGCACATGtaatatcaccctgcagcccaagactggtttcTCACTGAatttaagcagggctgagcctgatcAGTATCTGAATGGGAGACCATATGAGGAAACTAGGTTGCGGTTGGAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000179081

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00027354 lncRNA downstream 192444 28601593 ~ 28603115 (-) True XLOC_013479
TCONS_00026589 lncRNA downstream 471773 28320730 ~ 28323786 (-) False XLOC_013478
TCONS_00027353 lncRNA downstream 573811 28204344 ~ 28221748 (-) True XLOC_013477
TCONS_00027351 lncRNA downstream 975607 27802551 ~ 27819952 (-) False XLOC_013475
TCONS_00026972 lncRNA downstream 975653 27818134 ~ 27819906 (-) True XLOC_013475
TCONS_00027355 lncRNA upstream 602265 29397940 ~ 29403016 (-) True XLOC_013485
TCONS_00027356 lncRNA upstream 1956809 30752484 ~ 30753423 (-) True XLOC_013493
TCONS_00027357 lncRNA upstream 2164497 30960172 ~ 30961069 (-) True XLOC_013495
TCONS_00026613 lncRNA upstream 2253814 31049489 ~ 31051597 (-) True XLOC_013496
TCONS_00026973 lncRNA upstream 2928431 31724106 ~ 31724812 (-) True XLOC_013500
TCONS_00026587 mRNA downstream 898342 27843840 ~ 27897217 (-) True XLOC_013476
TCONS_00026586 mRNA downstream 937436 27843776 ~ 27858123 (-) False XLOC_013476
TCONS_00026585 mRNA downstream 1166775 27590442 ~ 27628784 (-) True XLOC_013473
TCONS_00026583 mRNA downstream 1478960 27309404 ~ 27316599 (-) True XLOC_013470
TCONS_00026580 mRNA downstream 1817619 26967414 ~ 26977940 (-) True XLOC_013466
TCONS_00026591 mRNA upstream 141386 28937061 ~ 28938912 (-) True XLOC_013481
TCONS_00026595 mRNA upstream 1089515 29885190 ~ 29896367 (-) False XLOC_013486
TCONS_00026596 mRNA upstream 1093284 29888959 ~ 29898369 (-) False XLOC_013486
TCONS_00026597 mRNA upstream 1093733 29889408 ~ 29898351 (-) False XLOC_013486
TCONS_00026600 mRNA upstream 1127264 29922939 ~ 29925717 (-) True XLOC_013488
TCONS_00026588 other downstream 471404 28320730 ~ 28324155 (-) True XLOC_013478
TCONS_00026584 other downstream 1460500 27334941 ~ 27335059 (-) True XLOC_013471
TCONS_00026582 other downstream 1488519 27306924 ~ 27307040 (-) True XLOC_013469
TCONS_00026581 other downstream 1658577 27136865 ~ 27136982 (-) True XLOC_013468
TCONS_00026577 other downstream 1900856 26880472 ~ 26894703 (-) False XLOC_013464
TCONS_00026592 other upstream 289383 29085058 ~ 29085174 (-) True XLOC_013482
TCONS_00026593 other upstream 417458 29213133 ~ 29213249 (-) True XLOC_013483
TCONS_00026594 other upstream 511850 29307525 ~ 29307641 (-) True XLOC_013484
TCONS_00026598 other upstream 1099936 29895611 ~ 29898361 (-) True XLOC_013486
TCONS_00026599 other upstream 1122387 29918062 ~ 29919105 (-) True XLOC_013487