RNA id: TCONS_00026594



Basic Information


Item Value
RNA id TCONS_00026594
length 117
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_013484
representative True

Chromosome Information


Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 29307525 ~ 29307641 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


TGGCATAGCCATATCACCCAGCAGGCCAAGATCAGTTTGTCAATGAAGATAAGcaaggctgagcctggtcagtacctggatgggggatcacatgggaaaactaggttgctgttggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000177912

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00027354 lncRNA downstream 704410 28601593 ~ 28603115 (-) True XLOC_013479
TCONS_00026589 lncRNA downstream 983739 28320730 ~ 28323786 (-) False XLOC_013478
TCONS_00027353 lncRNA downstream 1085777 28204344 ~ 28221748 (-) True XLOC_013477
TCONS_00026972 lncRNA downstream 1487619 27818134 ~ 27819906 (-) True XLOC_013475
TCONS_00027352 lncRNA downstream 1487811 27817198 ~ 27819714 (-) False XLOC_013475
TCONS_00027355 lncRNA upstream 90299 29397940 ~ 29403016 (-) True XLOC_013485
TCONS_00027356 lncRNA upstream 1444843 30752484 ~ 30753423 (-) True XLOC_013493
TCONS_00027357 lncRNA upstream 1652531 30960172 ~ 30961069 (-) True XLOC_013495
TCONS_00026613 lncRNA upstream 1741848 31049489 ~ 31051597 (-) True XLOC_013496
TCONS_00026973 lncRNA upstream 2416465 31724106 ~ 31724812 (-) True XLOC_013500
TCONS_00026591 mRNA downstream 368613 28937061 ~ 28938912 (-) True XLOC_013481
TCONS_00026587 mRNA downstream 1410308 27843840 ~ 27897217 (-) True XLOC_013476
TCONS_00026586 mRNA downstream 1449402 27843776 ~ 27858123 (-) False XLOC_013476
TCONS_00026585 mRNA downstream 1678741 27590442 ~ 27628784 (-) True XLOC_013473
TCONS_00026583 mRNA downstream 1990926 27309404 ~ 27316599 (-) True XLOC_013470
TCONS_00026595 mRNA upstream 577549 29885190 ~ 29896367 (-) False XLOC_013486
TCONS_00026596 mRNA upstream 581318 29888959 ~ 29898369 (-) False XLOC_013486
TCONS_00026597 mRNA upstream 581767 29889408 ~ 29898351 (-) False XLOC_013486
TCONS_00026600 mRNA upstream 615298 29922939 ~ 29925717 (-) True XLOC_013488
TCONS_00026601 mRNA upstream 651012 29958653 ~ 29961818 (-) False XLOC_013489
TCONS_00026593 other downstream 94276 29213133 ~ 29213249 (-) True XLOC_013483
TCONS_00026592 other downstream 222351 29085058 ~ 29085174 (-) True XLOC_013482
TCONS_00026590 other downstream 511850 28795559 ~ 28795675 (-) True XLOC_013480
TCONS_00026588 other downstream 983370 28320730 ~ 28324155 (-) True XLOC_013478
TCONS_00026584 other downstream 1972466 27334941 ~ 27335059 (-) True XLOC_013471
TCONS_00026598 other upstream 587970 29895611 ~ 29898361 (-) True XLOC_013486
TCONS_00026599 other upstream 610421 29918062 ~ 29919105 (-) True XLOC_013487
TCONS_00026611 other upstream 1546855 30854496 ~ 30855535 (-) True XLOC_013494
TCONS_00026625 other upstream 3217770 32525411 ~ 32527104 (-) True XLOC_013509
TCONS_00026632 other upstream 3782802 33090443 ~ 33093741 (-) False XLOC_013517