Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU58077 |
| length | 219 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G51983 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 47895827 ~ 47896045 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU58040 | lncRNA | upstream | 21343 | 47873533 ~ 47874484 (+) | True | G51946 |
| TU57611 | lncRNA | upstream | 42495 | 47836164 ~ 47853332 (+) | False | LOC110524181 |
| TU57615 | lncRNA | upstream | 44541 | 47839559 ~ 47851286 (+) | True | LOC110524181 |
| TU57619 | lncRNA | upstream | 61466 | 47827531 ~ 47834361 (+) | False | LOC110524181 |
| TU57621 | lncRNA | upstream | 65798 | 47827531 ~ 47830029 (+) | False | LOC110524181 |
| TU58128 | lncRNA | downstream | 29915 | 47925960 ~ 47926333 (+) | True | G52034 |
| TU58142 | lncRNA | downstream | 40343 | 47936388 ~ 47936693 (+) | True | G52048 |
| TU58157 | lncRNA | downstream | 48425 | 47944470 ~ 47944802 (+) | True | G52063 |
| TU58185 | lncRNA | downstream | 128285 | 48024330 ~ 48030842 (+) | True | G52086 |
| TU58198 | lncRNA | downstream | 146002 | 48042047 ~ 48042350 (+) | True | G52099 |
| XM_036979069.1 | mRNA | upstream | 44668 | 47824536 ~ 47851159 (+) | False | LOC110524181 |
| XM_036989632.1 | mRNA | upstream | 71363 | 47789067 ~ 47824464 (+) | True | LOC110520968 |
| XM_021603550.2 | mRNA | upstream | 126018 | 47733556 ~ 47769809 (+) | False | LOC110524160 |
| XM_021603558.2 | mRNA | upstream | 126018 | 47733558 ~ 47769809 (+) | True | LOC110524160 |
| XM_036979007.1 | mRNA | upstream | 316665 | 47430735 ~ 47579162 (+) | False | LOC110524112 |
| XM_036979084.1 | mRNA | downstream | 53420 | 47949465 ~ 47978305 (+) | False | rpgrip1l |
| XM_021603604.2 | mRNA | downstream | 53691 | 47949736 ~ 47978305 (+) | False | rpgrip1l |
| XM_036979077.1 | mRNA | downstream | 53691 | 47949736 ~ 47978305 (+) | True | rpgrip1l |
| XM_021603625.2 | mRNA | downstream | 87001 | 47983046 ~ 48013346 (+) | False | LOC110524199 |
| XM_021603636.2 | mRNA | downstream | 87001 | 47983046 ~ 48013346 (+) | False | LOC110524199 |
| TU56739 | other | upstream | 636929 | 47227246 ~ 47258898 (+) | True | LOC110520864 |
| TU56623 | other | upstream | 1034363 | 46857908 ~ 46861464 (+) | True | LOC110524042 |
| TU55851 | other | upstream | 1902936 | 45992273 ~ 45992891 (+) | False | G50010 |
| TU55850 | other | upstream | 1902936 | 45992505 ~ 45992891 (+) | True | G50010 |
| TU55125 | other | upstream | 2159047 | 45735053 ~ 45736780 (+) | True | G49335 |
| TU58177 | other | downstream | 110629 | 48006674 ~ 48024958 (+) | True | G52080 |
| TU58443 | other | downstream | 484497 | 48380542 ~ 48383257 (+) | True | G52324 |
| TU59387 | other | downstream | 997452 | 48893497 ~ 48893912 (+) | True | G53181 |
| TU60888 | other | downstream | 2141529 | 50037574 ~ 50083996 (+) | True | LOC118964841 |
| TU62774 | other | downstream | 3553777 | 51449822 ~ 51450935 (+) | True | LOC110524575 |
