RNA id: TCONS_00026601



Basic Information


Item Value
RNA id TCONS_00026601
length 1216
RNA type mRNA
GC content 0.43
exon number 3
gene id XLOC_013489
representative False

Chromosome Information


Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 29958653 ~ 29962234 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


TGACTCCAAACATCCGTTCTCTCAGTTTACTTCACCAGTGCTGTGATTGAAGCTGTCCAGGATGGATGTCTCTGCAAGCTGTGCGTCAGACGATGCTGATGCAGAAAAACAGTCGGCGAATATTGACAGCTCAAAAAGGAACTCTGAGTCTTCGGGCAGAAAGTATGTCAATGTGTTACTGGATCTCAGTGAAGAGGATTACTGCATTGAGAACAACGTGTATTTGTTGCAGAGCCGCACTGGCTGGGAAGACGCTGTTGAAGGGTGGGCAAGATTTCCCTCTTTCGCTGCATTCCCTCAATCACAAAGAAAAGGTAAAAACAAGCAAGACGTCATCGTTTCTCATTGCCTTCTATGCGCGGACCTTAAACCATCTGAACTTGATTCTCAAACCCCTCTGAATCCTGCAAAAGAAACTCACAACACACTCTCCTCTCCCACTTCAGACGAACTCTACTCCTTTAGCTTATCTCTGAAAAATATGTCAGGGCCATTAATCAATAAACTGCTGTCAGGAGAGGAACTGTCTGCACAAAAGAAATCGCCAACAGTTTGCTATTATCAACCAGAATCGTGTCAACTGCTAAAAGAGCAGACAGTTGGTCTCAGCATTAGAAGCTTCAGTGTATTGCCGCCTCTTAAGGAGTCCAGGATCTTTTTAAAATCAGTGCAGCCCACAGATTGGCATCCAGCAGAGGAAGACAAGAACATGACGCCCAGAGATACCAGTGTTGAAGGTAAAATAAGTGCAGGAAATGATATCAAAACTCTCATGGACTTCACCCCAGGAGAGAATAGCTACAAGTGTAAAGGAGCTCTCGGCACAAAACACTGTCTGTCCCAGGACAATACTCAACTGCCTTCTACTTATAACATCAATTTTCAAAATAAGTACGAATTTCACTCCAGCGCCTTGCCCCAGTTTCCTGCACCCTTGGGACGAAATTTCAGGCAGGAAGAACTGACGAGGTCTTCAACCAGGAATAACACCAGCCATAGATTGTTTTCTAGCCACAAAACGAGAGATCTGAAAAGACCCGAAGCTCACCGACTAATGCTTATAGGAACTAGAGTTCACATGCCTTTGTGATGAATATCATTTTTCTTAGTTGCACCAGACTGTACAAAGTAGTGCAATACTGTTTTTAAATGGCAGgaatccaaacacatgctctacgTGTAGcaatatatgaaatattattttgcaactaaaata

Function


GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070705-199 No description available

Ensembl:

ensembl_id ENSDART00000140661

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00027355 lncRNA downstream 555637 29397940 ~ 29403016 (-) True XLOC_013485
TCONS_00027354 lncRNA downstream 1355538 28601593 ~ 28603115 (-) True XLOC_013479
TCONS_00026589 lncRNA downstream 1634867 28320730 ~ 28323786 (-) False XLOC_013478
TCONS_00027353 lncRNA downstream 1736905 28204344 ~ 28221748 (-) True XLOC_013477
TCONS_00026972 lncRNA downstream 2138747 27818134 ~ 27819906 (-) True XLOC_013475
TCONS_00027356 lncRNA upstream 790666 30752484 ~ 30753423 (-) True XLOC_013493
TCONS_00027357 lncRNA upstream 998354 30960172 ~ 30961069 (-) True XLOC_013495
TCONS_00026613 lncRNA upstream 1087671 31049489 ~ 31051597 (-) True XLOC_013496
TCONS_00026973 lncRNA upstream 1762288 31724106 ~ 31724812 (-) True XLOC_013500
TCONS_00026974 lncRNA upstream 1770805 31732623 ~ 31737816 (-) True XLOC_013501
TCONS_00026600 mRNA downstream 32936 29922939 ~ 29925717 (-) True XLOC_013488
TCONS_00026596 mRNA downstream 60284 29888959 ~ 29898369 (-) False XLOC_013486
TCONS_00026597 mRNA downstream 60302 29889408 ~ 29898351 (-) False XLOC_013486
TCONS_00026595 mRNA downstream 62286 29885190 ~ 29896367 (-) False XLOC_013486
TCONS_00026591 mRNA downstream 1019741 28937061 ~ 28938912 (-) True XLOC_013481
TCONS_00026604 mRNA upstream 6387 29968205 ~ 30020879 (-) False XLOC_013490
TCONS_00026605 mRNA upstream 7914 29969732 ~ 30021479 (-) False XLOC_013490
TCONS_00026606 mRNA upstream 8011 29969829 ~ 29977431 (-) False XLOC_013490
TCONS_00026607 mRNA upstream 8227 29970045 ~ 29972709 (-) True XLOC_013490
TCONS_00026608 mRNA upstream 519212 30481030 ~ 30499489 (-) True XLOC_013491
TCONS_00026599 other downstream 39548 29918062 ~ 29919105 (-) True XLOC_013487
TCONS_00026598 other downstream 60292 29895611 ~ 29898361 (-) True XLOC_013486
TCONS_00026594 other downstream 651012 29307525 ~ 29307641 (-) True XLOC_013484
TCONS_00026593 other downstream 745404 29213133 ~ 29213249 (-) True XLOC_013483
TCONS_00026592 other downstream 873479 29085058 ~ 29085174 (-) True XLOC_013482
TCONS_00026611 other upstream 892678 30854496 ~ 30855535 (-) True XLOC_013494
TCONS_00026625 other upstream 2563593 32525411 ~ 32527104 (-) True XLOC_013509
TCONS_00026632 other upstream 3128625 33090443 ~ 33093741 (-) False XLOC_013517
TCONS_00026656 other upstream 5611363 35573181 ~ 35573295 (-) True XLOC_013536
TCONS_00026662 other upstream 6493489 36455307 ~ 36465466 (-) True XLOC_013541

Expression Profile


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