Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU60013 |
| length | 330 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G53785 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 49384577 ~ 49384906 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU59905 | lncRNA | upstream | 83708 | 49300620 ~ 49300869 (+) | True | G53678 |
| TU59886 | lncRNA | upstream | 99034 | 49285279 ~ 49285543 (+) | True | G53659 |
| TU59881 | lncRNA | upstream | 101612 | 49282454 ~ 49282965 (+) | True | G53654 |
| TU59591 | lncRNA | upstream | 120498 | 49203295 ~ 49264079 (+) | True | G53375 |
| TU59599 | lncRNA | upstream | 157693 | 49224538 ~ 49226884 (+) | True | G53382 |
| TU60018 | lncRNA | downstream | 8945 | 49393851 ~ 49394069 (+) | True | G53790 |
| TU60039 | lncRNA | downstream | 34682 | 49419588 ~ 49419789 (+) | True | G53811 |
| TU60045 | lncRNA | downstream | 39479 | 49424385 ~ 49424641 (+) | True | G53817 |
| TU60100 | lncRNA | downstream | 130704 | 49515610 ~ 49516080 (+) | True | G53872 |
| TU60128 | lncRNA | downstream | 169808 | 49554714 ~ 49585866 (+) | True | G53899 |
| XM_021603917.2 | mRNA | upstream | 569564 | 48804907 ~ 48815013 (+) | False | LOC110524349 |
| XM_021603926.2 | mRNA | upstream | 569564 | 48804908 ~ 48815013 (+) | True | LOC110524349 |
| LOC110532376 | mRNA | upstream | 586073 | 48759039 ~ 48798504 (+) | True | LOC110532376 |
| XM_036979261.1 | mRNA | upstream | 678008 | 48635499 ~ 48706569 (+) | True | cttnbp2 |
| XR_005051992.1 | mRNA | upstream | 679481 | 48635495 ~ 48705096 (+) | False | cttnbp2 |
| XM_021604008.2 | mRNA | downstream | 50856 | 49435762 ~ 49440232 (+) | True | LOC110524405 |
| XM_021578809.2 | mRNA | downstream | 281626 | 49666532 ~ 49702958 (+) | False | kitlg |
| NM_001281361.1 | mRNA | downstream | 281638 | 49666544 ~ 49700375 (+) | True | kitlg |
| XR_005052015.1 | mRNA | downstream | 439004 | 49823910 ~ 49834003 (+) | False | LOC110524421 |
| XR_005052016.1 | mRNA | downstream | 439010 | 49823916 ~ 49834003 (+) | False | LOC110524421 |
| TU59387 | other | upstream | 490665 | 48893497 ~ 48893912 (+) | True | G53181 |
| TU58443 | other | upstream | 1001320 | 48380542 ~ 48383257 (+) | True | G52324 |
| TU58177 | other | upstream | 1359619 | 48006674 ~ 48024958 (+) | True | G52080 |
| TU56739 | other | upstream | 2125679 | 47227246 ~ 47258898 (+) | True | LOC110520864 |
| TU56623 | other | upstream | 2523113 | 46857908 ~ 46861464 (+) | True | LOC110524042 |
| TU60888 | other | downstream | 652668 | 50037574 ~ 50083996 (+) | True | LOC118964841 |
| TU62774 | other | downstream | 2064916 | 51449822 ~ 51450935 (+) | True | LOC110524575 |
| TU65446 | other | downstream | 4281309 | 53666215 ~ 53671273 (+) | True | LOC118936380 |
| TU65626 | other | downstream | 4603234 | 53988140 ~ 53988597 (+) | True | G59031 |
| TU65668 | other | downstream | 4659943 | 54044849 ~ 54062254 (+) | False | LOC110525327 |
