Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU60400 |
| length | 318 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G54160 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 49410646 ~ 49410963 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU60399 | lncRNA | downstream | 138 | 49410298 ~ 49410508 (-) | True | G54159 |
| TU60385 | lncRNA | downstream | 19078 | 49391305 ~ 49391568 (-) | True | G54145 |
| TU60371 | lncRNA | downstream | 30281 | 49380105 ~ 49380365 (-) | True | G54131 |
| TU59987 | lncRNA | downstream | 51326 | 49359002 ~ 49359320 (-) | True | G53759 |
| TU59986 | lncRNA | downstream | 52091 | 49358334 ~ 49358555 (-) | True | G53758 |
| TU60404 | lncRNA | upstream | 3017 | 49413980 ~ 49414198 (-) | True | G54164 |
| TU60411 | lncRNA | upstream | 11358 | 49422321 ~ 49422587 (-) | True | G54171 |
| TU60613 | lncRNA | upstream | 290259 | 49701222 ~ 49706211 (-) | True | G54367 |
| TU60662 | lncRNA | upstream | 416462 | 49827425 ~ 49840996 (-) | True | G54411 |
| TU60676 | lncRNA | upstream | 440081 | 49851044 ~ 49901421 (-) | True | G54425 |
| NM_001165141.2 | mRNA | downstream | 182015 | 49224712 ~ 49228631 (-) | True | cbpa1 |
| XM_036979383.1 | mRNA | downstream | 202129 | 49180132 ~ 49208517 (-) | True | LOC110524388 |
| XM_021603973.2 | mRNA | downstream | 305911 | 49098552 ~ 49104735 (-) | True | LOC110524381 |
| XM_021603952.2 | mRNA | downstream | 329932 | 49067489 ~ 49080714 (-) | True | LOC110524368 |
| XM_021603960.2 | mRNA | downstream | 330753 | 49067489 ~ 49079893 (-) | False | LOC110524368 |
| LOC110532387 | mRNA | upstream | 353032 | 49763995 ~ 49822972 (-) | True | LOC110532387 |
| XM_036979394.1 | mRNA | upstream | 437415 | 49848378 ~ 49876492 (-) | True | LOC110524413 |
| XM_021604073.2 | mRNA | upstream | 849441 | 50260404 ~ 50270301 (-) | True | LOC110524441 |
| XM_036979433.1 | mRNA | upstream | 956603 | 50367566 ~ 50374531 (-) | False | LOC110524445 |
| XM_021604086.2 | mRNA | upstream | 956611 | 50367574 ~ 50374531 (-) | True | LOC110524445 |
| TU59630 | other | downstream | 424729 | 48984185 ~ 48985917 (-) | True | LOC110532382 |
| TU59011 | other | downstream | 1106510 | 48294108 ~ 48304136 (-) | True | LOC110524264 |
| TU57798 | other | downstream | 1849437 | 47542376 ~ 47561209 (-) | True | LOC110524104 |
| TU57725 | other | downstream | 2032103 | 47377641 ~ 47378543 (-) | True | G51649 |
| TU57327 | other | downstream | 2120965 | 47288939 ~ 47289681 (-) | True | G51285 |
| TU61709 | other | upstream | 1000671 | 50411634 ~ 50412128 (-) | True | G55408 |
| TU61943 | other | upstream | 1354400 | 50765363 ~ 50767431 (-) | True | G55627 |
| TU61953 | other | upstream | 1366784 | 50777747 ~ 50783844 (-) | False | LOC110524514 |
| TU61955 | other | upstream | 1366784 | 50777747 ~ 50792069 (-) | False | LOC110524514 |
| TU61958 | other | upstream | 1366784 | 50777747 ~ 50783844 (-) | True | LOC110524514 |
