Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU60843 |
| length | 219 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G54590 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 49998185 ~ 49998403 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU60825 | lncRNA | downstream | 10619 | 49987195 ~ 49987566 (-) | True | G54572 |
| TU60789 | lncRNA | downstream | 29637 | 49967643 ~ 49968548 (-) | True | G54536 |
| TU60781 | lncRNA | downstream | 35344 | 49962642 ~ 49962841 (-) | True | G54528 |
| TU60766 | lncRNA | downstream | 48274 | 49949173 ~ 49949911 (-) | True | G54513 |
| TU60676 | lncRNA | downstream | 96764 | 49851044 ~ 49901421 (-) | True | G54425 |
| TU60865 | lncRNA | upstream | 11127 | 50009530 ~ 50009769 (-) | True | G54612 |
| TU60868 | lncRNA | upstream | 14106 | 50012509 ~ 50012738 (-) | True | G54615 |
| TU61696 | lncRNA | upstream | 388603 | 50387006 ~ 50387249 (-) | True | G55395 |
| TU61717 | lncRNA | upstream | 425218 | 50423621 ~ 50423840 (-) | True | G55416 |
| TU61718 | lncRNA | upstream | 426082 | 50424485 ~ 50424743 (-) | True | G55417 |
| XM_036979394.1 | mRNA | downstream | 121693 | 49848378 ~ 49876492 (-) | True | LOC110524413 |
| LOC110532387 | mRNA | downstream | 175213 | 49763995 ~ 49822972 (-) | True | LOC110532387 |
| NM_001165141.2 | mRNA | downstream | 769554 | 49224712 ~ 49228631 (-) | True | cbpa1 |
| XM_036979383.1 | mRNA | downstream | 789668 | 49180132 ~ 49208517 (-) | True | LOC110524388 |
| XM_021603973.2 | mRNA | downstream | 893450 | 49098552 ~ 49104735 (-) | True | LOC110524381 |
| XM_021604073.2 | mRNA | upstream | 262001 | 50260404 ~ 50270301 (-) | True | LOC110524441 |
| XM_036979433.1 | mRNA | upstream | 369163 | 50367566 ~ 50374531 (-) | False | LOC110524445 |
| XM_021604086.2 | mRNA | upstream | 369171 | 50367574 ~ 50374531 (-) | True | LOC110524445 |
| XM_036979494.1 | mRNA | upstream | 720233 | 50718636 ~ 50720968 (-) | False | LOC110524488 |
| XM_021604198.2 | mRNA | upstream | 720233 | 50718636 ~ 50752172 (-) | True | LOC110524488 |
| TU59630 | other | downstream | 1012268 | 48984185 ~ 48985917 (-) | True | LOC110532382 |
| TU59011 | other | downstream | 1694049 | 48294108 ~ 48304136 (-) | True | LOC110524264 |
| TU57798 | other | downstream | 2436976 | 47542376 ~ 47561209 (-) | True | LOC110524104 |
| TU57725 | other | downstream | 2619642 | 47377641 ~ 47378543 (-) | True | G51649 |
| TU57327 | other | downstream | 2708504 | 47288939 ~ 47289681 (-) | True | G51285 |
| TU61709 | other | upstream | 413231 | 50411634 ~ 50412128 (-) | True | G55408 |
| TU61943 | other | upstream | 766960 | 50765363 ~ 50767431 (-) | True | G55627 |
| TU61953 | other | upstream | 779344 | 50777747 ~ 50783844 (-) | False | LOC110524514 |
| TU61955 | other | upstream | 779344 | 50777747 ~ 50792069 (-) | False | LOC110524514 |
| TU61958 | other | upstream | 779344 | 50777747 ~ 50783844 (-) | True | LOC110524514 |
