RNA id: TCONS_00026611


Basic Information

Item Value
RNA id TCONS_00026611
length 462
RNA type processed_transcript
GC content 0.30
exon number 2
gene id XLOC_013494
representative True

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 30854496 ~ 30855535 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gtctttaaaaggatggggctcttatatcatatgtgaagttacctattcaggtgctttttgggcaccagtttggagatggaagacagacgaagtcaaagaagcagagaagacacatcaaccagcaagtgtgtaaaattatcaggaaaaagattgaccttgaatagacgactgcctaatttagcaagaagttttttctctttctctcatgtttgtatgtatgtatgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataatgagagagagagagagcgcactctgaagcactgctttttatatgtatgctacatatgatgtcagatttttttattaatatgttcttatagtattttttgaggcttcaccttttgaaagttttctgaaatgtttacacagatgtcattaagctgttaaataaatctgtaaaatgta

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000143297

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00027356 lncRNA downstream 101073 30752484 ~ 30753423 (-) True XLOC_013493
TCONS_00027355 lncRNA downstream 1451480 29397940 ~ 29403016 (-) True XLOC_013485
TCONS_00027354 lncRNA downstream 2251381 28601593 ~ 28603115 (-) True XLOC_013479
TCONS_00026589 lncRNA downstream 2530710 28320730 ~ 28323786 (-) False XLOC_013478
TCONS_00027353 lncRNA downstream 2632748 28204344 ~ 28221748 (-) True XLOC_013477
TCONS_00027357 lncRNA upstream 104637 30960172 ~ 30961069 (-) True XLOC_013495
TCONS_00026613 lncRNA upstream 193954 31049489 ~ 31051597 (-) True XLOC_013496
TCONS_00026973 lncRNA upstream 868571 31724106 ~ 31724812 (-) True XLOC_013500
TCONS_00026974 lncRNA upstream 877088 31732623 ~ 31737816 (-) True XLOC_013501
TCONS_00026619 lncRNA upstream 1149523 32005058 ~ 32008314 (-) False XLOC_013504
TCONS_00026609 mRNA downstream 349844 30500690 ~ 30504652 (-) False XLOC_013492
TCONS_00026610 mRNA downstream 349909 30501720 ~ 30504587 (-) True XLOC_013492
TCONS_00026608 mRNA downstream 355007 30481030 ~ 30499489 (-) True XLOC_013491
TCONS_00026605 mRNA downstream 833017 29969732 ~ 30021479 (-) False XLOC_013490
TCONS_00026604 mRNA downstream 833617 29968205 ~ 30020879 (-) False XLOC_013490
TCONS_00026612 mRNA upstream 177587 31033122 ~ 31051847 (-) False XLOC_013496
TCONS_00026614 mRNA upstream 234422 31089957 ~ 31105391 (-) True XLOC_013497
TCONS_00026615 mRNA upstream 370753 31226288 ~ 31227615 (-) True XLOC_013498
TCONS_00026616 mRNA upstream 443541 31299076 ~ 31423569 (-) True XLOC_013499
TCONS_00026617 mRNA upstream 1057224 31912759 ~ 31916845 (-) True XLOC_013502
TCONS_00026599 other downstream 935391 29918062 ~ 29919105 (-) True XLOC_013487
TCONS_00026598 other downstream 956135 29895611 ~ 29898361 (-) True XLOC_013486
TCONS_00026594 other downstream 1546855 29307525 ~ 29307641 (-) True XLOC_013484
TCONS_00026593 other downstream 1641247 29213133 ~ 29213249 (-) True XLOC_013483
TCONS_00026592 other downstream 1769322 29085058 ~ 29085174 (-) True XLOC_013482
TCONS_00026625 other upstream 1669876 32525411 ~ 32527104 (-) True XLOC_013509
TCONS_00026632 other upstream 2234908 33090443 ~ 33093741 (-) False XLOC_013517
TCONS_00026656 other upstream 4717646 35573181 ~ 35573295 (-) True XLOC_013536
TCONS_00026662 other upstream 5599772 36455307 ~ 36465466 (-) True XLOC_013541
TCONS_00026673 other upstream 6554288 37409823 ~ 37415353 (-) False XLOC_013550

Expression Profile

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