RNA id: TU64156



Basic Information


Item Value
RNA id TU64156
length 276
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G57730
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 52483952 ~ 52484227 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ttacatACACTTGGGTTAGAGTCACTGAAACTTGTTTCTGAACCACtcctcaaatttcttgttaacaaactagagttttggcaagttggttaggacatctactttgtgcatgacacaagtcatttttccaacaattgtttacagacagattatttcacttatgattcactgtatcacaattgcagtgggtcagaaatgtacatacactaagttgactgtgcctttaaacagcttagaaaattccagaaaatgatgtcatggctttagaaacttcta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU64143 lncRNA downstream 4169 52479566 ~ 52479783 (-) True G57717
TU64141 lncRNA downstream 4650 52479076 ~ 52479302 (-) True G57715
TU64123 lncRNA downstream 16046 52467665 ~ 52467906 (-) True G57698
TU64121 lncRNA downstream 17284 52466309 ~ 52466668 (-) True G57696
TU64099 lncRNA downstream 33894 52449837 ~ 52450058 (-) True G57674
TU64167 lncRNA upstream 10946 52495173 ~ 52495466 (-) True G57741
TU64382 lncRNA upstream 54119 52538346 ~ 52540057 (-) True G57917
TU64419 lncRNA upstream 61838 52546065 ~ 52551208 (-) True G57949
TU64421 lncRNA upstream 63512 52547739 ~ 52549229 (-) True G57950
TU64527 lncRNA upstream 219610 52703837 ~ 52755442 (-) True G58040
LOC110532407 mRNA downstream 21830 52459257 ~ 52462122 (-) True LOC110532407
XM_036979724.1 mRNA downstream 35652 52333895 ~ 52448300 (-) False LOC110524680
XR_005051372.1 mRNA upstream 15112 52499339 ~ 52503763 (-) True LOC118964321
XM_021604632.2 mRNA upstream 80795 52565022 ~ 52588220 (-) False LOC110524730
XM_021604642.2 mRNA upstream 80795 52565022 ~ 52588220 (-) False LOC110524730
XM_021604624.2 mRNA upstream 80795 52565022 ~ 52588273 (-) False LOC110524730
XM_036979769.1 mRNA upstream 80795 52565022 ~ 52588273 (-) False LOC110524730
TU63128 other downstream 736732 51746617 ~ 51747220 (-) True G56764
TU62721 other downstream 1079609 51400727 ~ 51404343 (-) False G56372
TU61955 other downstream 1691883 50777747 ~ 50792069 (-) False LOC110524514
TU61953 other downstream 1700108 50777747 ~ 50783844 (-) False LOC110524514
TU64168 other upstream 11671 52495898 ~ 52496234 (-) True G57742
TU65118 other upstream 655231 53139458 ~ 53140304 (-) True G58565
TU65226 other upstream 850497 53334724 ~ 53338387 (-) False LOC110525078
TU65227 other upstream 852382 53336609 ~ 53338387 (-) True LOC110525078
TU65285 other upstream 941737 53425964 ~ 53426316 (-) True G58718

Expression Profile