RNA id: TU65804



Basic Information


Item Value
RNA id TU65804
length 188
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G59189
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53984637 ~ 53984824 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tTCAAGGATGCCAAATATTTTGGAGGTGACTGTaagtgtaacggctttcttccgtcaaaggagaggaggaccaaaatgcagtgtagttcgtgttcaacatgtttaatgaaAGACGATAACGTGAACaatacacaaatacaaaataacaaacgtggcaaaaccgaaacagtcctatctggtgcagagaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU65808 lncRNA downstream 1363 53982902 ~ 53983274 (-) True G59193
TU65814 lncRNA downstream 8527 53975826 ~ 53976110 (-) True G59199
TU65813 lncRNA downstream 9554 53974869 ~ 53975083 (-) True G59198
TU65812 lncRNA downstream 9774 53974643 ~ 53974863 (-) True G59197
TU65811 lncRNA downstream 10136 53974205 ~ 53974501 (-) True G59196
TU65796 lncRNA upstream 1715 53986539 ~ 53987790 (-) True G59181
TU65800 lncRNA upstream 3157 53987981 ~ 53988486 (-) True G59185
TU65794 lncRNA upstream 64124 54048948 ~ 54106163 (-) True G59180
TU65836 lncRNA upstream 68955 54053779 ~ 54112156 (-) True G59220
TU66259 lncRNA upstream 129716 54114540 ~ 54114892 (-) False LOC110525336
XR_005051434.1 mRNA downstream 110401 53872120 ~ 53874236 (-) True LOC118964352
XR_005051433.1 mRNA downstream 110612 53872120 ~ 53874025 (-) False LOC118964352
XR_005051444.1 mRNA downstream 110612 53872120 ~ 53874025 (-) False LOC118964352
XM_036980365.1 mRNA downstream 116547 53853860 ~ 53868090 (-) True LOC110525263
XM_036980360.1 mRNA downstream 116548 53853860 ~ 53868089 (-) False LOC110525263
XM_021605344.2 mRNA upstream 4703 53989527 ~ 54019550 (-) True LOC110525320
XM_036980395.1 mRNA upstream 128315 54113139 ~ 54223986 (-) False LOC110525336
XM_036980399.1 mRNA upstream 128315 54113139 ~ 54223986 (-) False LOC110525336
XM_036980401.1 mRNA upstream 128315 54113139 ~ 54223986 (-) False LOC110525336
XM_036980403.1 mRNA upstream 128315 54113139 ~ 54223986 (-) False LOC110525336
TU65545 other downstream 187623 53791830 ~ 53797014 (-) True G58958
TU65542 other downstream 221741 53761955 ~ 53762896 (-) True LOC110525178
TU65415 other downstream 395867 53588422 ~ 53588770 (-) True G58842
TU65285 other downstream 558321 53425964 ~ 53426316 (-) True G58718
TU65227 other downstream 646250 53336609 ~ 53338387 (-) True LOC110525078
TU66641 other upstream 744307 54729131 ~ 54737244 (-) True G59978
TU67198 other upstream 1085568 55070392 ~ 55070899 (-) True G60516
TU67257 other upstream 1165417 55150241 ~ 55154258 (-) True G60572
TU67299 other upstream 1208473 55193297 ~ 55193723 (-) True G60614
TU67309 other upstream 1218593 55203417 ~ 55203742 (-) True G60624

Expression Profile