Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU71238 |
| length | 728 |
| RNA type | TUCP |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G64292 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 58586858 ~ 58587585 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU71194 | lncRNA | upstream | 164 | 58585290 ~ 58586694 (+) | True | G64248 |
| TU71220 | lncRNA | upstream | 26388 | 58560233 ~ 58560470 (+) | True | G64274 |
| TU71219 | lncRNA | upstream | 27588 | 58559071 ~ 58559270 (+) | True | G64273 |
| TU71215 | lncRNA | upstream | 32288 | 58554212 ~ 58554570 (+) | True | G64269 |
| TU71196 | lncRNA | upstream | 32955 | 58553678 ~ 58553903 (+) | True | G64250 |
| TU71239 | lncRNA | downstream | 248 | 58587833 ~ 58588113 (+) | True | G64293 |
| TU71188 | lncRNA | downstream | 3528 | 58591113 ~ 58661566 (+) | True | G64242 |
| TU71185 | lncRNA | downstream | 9123 | 58596708 ~ 58598513 (+) | False | G64241 |
| TU71187 | lncRNA | downstream | 9123 | 58596708 ~ 58597225 (+) | True | G64241 |
| TU71258 | lncRNA | downstream | 74126 | 58661711 ~ 58661946 (+) | True | G64312 |
| XR_005052202.1 | mRNA | upstream | 623035 | 57961716 ~ 57963823 (+) | True | LOC110525578 |
| XM_021605791.2 | mRNA | upstream | 648870 | 57806134 ~ 57937988 (+) | False | wdr11 |
| XM_036989719.1 | mRNA | upstream | 821460 | 57622267 ~ 57765398 (+) | True | LOC110525562 |
| XR_005052200.1 | mRNA | upstream | 864833 | 57694498 ~ 57722025 (+) | True | LOC118964920 |
| XM_021605762.2 | mRNA | upstream | 1524007 | 57035617 ~ 57062851 (+) | True | vsir |
| XM_036980882.1 | mRNA | downstream | 220785 | 58808370 ~ 58838199 (+) | False | fam160b1 |
| XM_036980886.1 | mRNA | downstream | 221099 | 58808684 ~ 58838199 (+) | True | fam160b1 |
| trnaa-ugc | mRNA | downstream | 474222 | 59061807 ~ 59061880 (+) | True | trnaa-ugc |
| XR_002473818.2 | mRNA | downstream | 622421 | 59210006 ~ 59212175 (+) | True | LOC110525756 |
| XM_021606181.2 | mRNA | downstream | 696739 | 59284324 ~ 59299682 (+) | False | erlin1 |
| TU70900 | other | upstream | 363728 | 58221522 ~ 58223130 (+) | True | G63959 |
| TU70899 | other | upstream | 364006 | 58221522 ~ 58222852 (+) | False | G63959 |
| TU70898 | other | upstream | 418680 | 58166565 ~ 58168178 (+) | True | G63958 |
| TU68593 | other | upstream | 2334843 | 56249888 ~ 56252015 (+) | True | G61806 |
| TU68590 | other | upstream | 2339088 | 56246584 ~ 56247770 (+) | True | G61804 |
| TU71261 | other | downstream | 77749 | 58665334 ~ 58665906 (+) | True | G64315 |
| TU71284 | other | downstream | 111711 | 58699296 ~ 58700379 (+) | True | G64338 |
| TU72488 | other | downstream | 737051 | 59324636 ~ 59325129 (+) | True | G65442 |
| TU73321 | other | downstream | 1353901 | 59941486 ~ 59942064 (+) | True | G66188 |
| TU75047 | other | downstream | 2727289 | 61314874 ~ 61315252 (+) | True | G67806 |
