RNA id: TU73959



Basic Information


Item Value
RNA id TU73959
length 279
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G66784
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 59964110 ~ 59964388 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gccggggactctggaccgtggatcgtcgccggaggctccgaaCTGGGAACccccgctggaggctccggactgggaaccatcgctagaggctccgggccatggatcatcactggaggctctgggccatggatcatcactggaggctccgggccatggatcatcactggaggctccgggccatggatcatcactggaggctctgggccatggatcatcactggaggcttcgtgccatggataatcactggaggcttcgtgccatggataatcactggaggc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73958 lncRNA downstream 1537 59962352 ~ 59962573 (-) True G66783
TU73957 lncRNA downstream 1808 59962057 ~ 59962302 (-) True G66782
TU73948 lncRNA downstream 13237 59950649 ~ 59950873 (-) True G66773
TU73944 lncRNA downstream 16770 59947049 ~ 59947340 (-) True G66769
TU73942 lncRNA downstream 17931 59945919 ~ 59946179 (-) True G66767
TU73960 lncRNA upstream 419 59964807 ~ 59965074 (-) True G66785
TU73962 lncRNA upstream 3554 59967942 ~ 59968402 (-) True G66787
TU73963 lncRNA upstream 4200 59968588 ~ 59968794 (-) True G66788
TU73991 lncRNA upstream 48718 60013106 ~ 60013409 (-) True G66816
TU73992 lncRNA upstream 50749 60015137 ~ 60015430 (-) True G66817
LOC110532486 mRNA downstream 319825 59641779 ~ 59644285 (-) False LOC110532486
XM_021606304.2 mRNA downstream 447378 59511553 ~ 59516732 (-) False tmem72
XM_021606321.2 mRNA downstream 447378 59511553 ~ 59516732 (-) True tmem72
XM_021606312.2 mRNA downstream 447460 59511553 ~ 59516650 (-) False tmem72
XM_021606291.2 mRNA downstream 457042 59438585 ~ 59507068 (-) True rassf4a
XR_005052269.1 mRNA upstream 52608 60016996 ~ 60024584 (-) False LOC118964951
XM_036981267.1 mRNA upstream 62830 60027218 ~ 60064905 (-) False LOC110525944
XM_036981284.1 mRNA upstream 62830 60027218 ~ 60064906 (-) False LOC110525944
XM_036981276.1 mRNA upstream 64719 60029107 ~ 60064905 (-) True LOC110525944
XM_021606503.2 mRNA upstream 125602 60089990 ~ 60124142 (-) False LOC110525964
TU72370 other downstream 808965 59144373 ~ 59155145 (-) True LOC110525695
TU72149 other downstream 1178493 58784742 ~ 58785617 (-) True G65147
TU70239 other downstream 2565622 57397194 ~ 57398488 (-) True G63328
TU70000 other downstream 2901262 57035667 ~ 57062848 (-) False G63093
TU74240 other upstream 465819 60430207 ~ 60461234 (-) True LOC110526097
TU76069 other upstream 1717890 61682278 ~ 61686308 (-) True G68736
TU76326 other upstream 2017343 61981731 ~ 61982395 (-) True LOC110526417
TU76624 other upstream 2447134 62411522 ~ 62418296 (-) True G69210
TU77510 other upstream 3312820 63277208 ~ 63277752 (-) True G70013

Expression Profile