RNA id: TU74069



Basic Information


Item Value
RNA id TU74069
length 232
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G66858
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 60127460 ~ 60127691 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTGTGGCAGATATAAAAACTATACTCTGTGAAAGGTGGCGAGCGAGGAGGGAAGGACTCTTCTGTTCTCCTACTAAGAAATTGACACTCTCCTTGACCACTTATCGGTTTCCGGGTctcgaggagagaggacagaggacggtCTTTTGGCCCAAACTAGAGAACCCCAGGGCCTGTGTGTTTTGAGGCTGAAGGGTCATCGGTCACAGTCAGCAGTGGCTGGTGGGAGATGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU74060 lncRNA downstream 28463 60097804 ~ 60098997 (-) True G66850
TU73994 lncRNA downstream 101000 60026237 ~ 60026460 (-) True G66819
TU73955 lncRNA downstream 106237 60017341 ~ 60021223 (-) True LOC118964951
TU73956 lncRNA downstream 110303 60016544 ~ 60017157 (-) False LOC118964951
TU73992 lncRNA downstream 112030 60015137 ~ 60015430 (-) True G66817
TU74085 lncRNA upstream 45971 60173662 ~ 60173861 (-) True G66874
TU74087 lncRNA upstream 48269 60175960 ~ 60176302 (-) True G66876
TU74089 lncRNA upstream 49986 60177677 ~ 60177945 (-) True G66878
TU74091 lncRNA upstream 52242 60179933 ~ 60180205 (-) True G66880
TU74117 lncRNA upstream 79792 60207483 ~ 60216533 (-) True G66905
XM_021606503.2 mRNA downstream 3318 60089990 ~ 60124142 (-) False LOC110525964
XM_021606512.2 mRNA downstream 3318 60089990 ~ 60124142 (-) False LOC110525964
XM_021606519.2 mRNA downstream 3318 60089990 ~ 60124142 (-) True LOC110525964
XM_036981284.1 mRNA downstream 62554 60027218 ~ 60064906 (-) False LOC110525944
XM_036981267.1 mRNA downstream 62555 60027218 ~ 60064905 (-) False LOC110525944
XM_036981396.1 mRNA upstream 2624 60130315 ~ 60148883 (-) False LOC110525977
XM_036981339.1 mRNA upstream 2624 60130315 ~ 60167367 (-) False LOC110525977
XM_036981389.1 mRNA upstream 2624 60130315 ~ 60167367 (-) False LOC110525977
XM_036981403.1 mRNA upstream 2624 60130315 ~ 60167367 (-) False LOC110525977
XM_036981415.1 mRNA upstream 2624 60130315 ~ 60167367 (-) False LOC110525977
TU72370 other downstream 972315 59144373 ~ 59155145 (-) True LOC110525695
TU72149 other downstream 1341843 58784742 ~ 58785617 (-) True G65147
TU70239 other downstream 2728972 57397194 ~ 57398488 (-) True G63328
TU70000 other downstream 3064612 57035667 ~ 57062848 (-) False G63093
TU74240 other upstream 302516 60430207 ~ 60461234 (-) True LOC110526097
TU76069 other upstream 1554587 61682278 ~ 61686308 (-) True G68736
TU76326 other upstream 1854040 61981731 ~ 61982395 (-) True LOC110526417
TU76624 other upstream 2283831 62411522 ~ 62418296 (-) True G69210
TU77510 other upstream 3149517 63277208 ~ 63277752 (-) True G70013

Expression Profile