RNA id: TU74117



Basic Information


Item Value
RNA id TU74117
length 287
lncRNA type antisense_over
GC content 0.59
exon number 2
gene id G66905
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 60207483 ~ 60216533 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CGATCGCTTTTTCTTTGAGTCTCTTCACCTCCTGGCTGTTTTCTCTAGATTCAGGCCGGTAGCCTGGtctgagagaggggCTGCGTGGACTACTGCCTCTGCGCCATGCCCGTCTGTGGGGAGAGCGGGAACGGGACCTACTCCAGGATCCAGATCGGGAAGAGGAGTAGGAATACCGCCGCCTGGGAGGAGAACGGGACacggaaggagaggaggaacgaGAGGAGGAACGAGAGGAGGAACGAGAGGAGCAAGACGAGGAACTGGAGCTGCTCTTAGAGTGACGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU74091 lncRNA downstream 27278 60179933 ~ 60180205 (-) True G66880
TU74089 lncRNA downstream 29538 60177677 ~ 60177945 (-) True G66878
TU74087 lncRNA downstream 31181 60175960 ~ 60176302 (-) True G66876
TU74085 lncRNA downstream 33622 60173662 ~ 60173861 (-) True G66874
TU74069 lncRNA downstream 79792 60127460 ~ 60127691 (-) True G66858
TU74139 lncRNA upstream 45344 60261877 ~ 60264201 (-) True G66922
TU74186 lncRNA upstream 92112 60308645 ~ 60308903 (-) True G66967
TU74185 lncRNA upstream 96277 60312810 ~ 60313056 (-) True G66966
TU74188 lncRNA upstream 99505 60316038 ~ 60316240 (-) True G66969
TU74231 lncRNA upstream 153264 60369797 ~ 60371381 (-) True G67011
XM_036981324.1 mRNA downstream 34941 60130315 ~ 60172542 (-) False LOC110525977
XM_036981332.1 mRNA downstream 34941 60130315 ~ 60172542 (-) False LOC110525977
XM_036981355.1 mRNA downstream 34941 60130315 ~ 60172542 (-) True LOC110525977
XM_036981383.1 mRNA downstream 34952 60130315 ~ 60172531 (-) False LOC110525977
XM_036981365.1 mRNA downstream 34959 60130315 ~ 60172524 (-) False LOC110525977
XM_021606648.2 mRNA upstream 65139 60281672 ~ 60301313 (-) False LOC110526047
XM_021606656.2 mRNA upstream 65139 60281672 ~ 60301313 (-) True LOC110526047
LOC110532500 mRNA upstream 118451 60334984 ~ 60336221 (-) True LOC110532500
XR_002473875.2 mRNA upstream 126056 60342589 ~ 60349188 (-) False LOC110526081
XR_002473877.2 mRNA upstream 126056 60342589 ~ 60349298 (-) False LOC110526081
TU72370 other downstream 1052338 59144373 ~ 59155145 (-) True LOC110525695
TU72149 other downstream 1421866 58784742 ~ 58785617 (-) True G65147
TU70239 other downstream 2808995 57397194 ~ 57398488 (-) True G63328
TU70000 other downstream 3144635 57035667 ~ 57062848 (-) False G63093
TU74240 other upstream 213674 60430207 ~ 60461234 (-) True LOC110526097
TU76069 other upstream 1465745 61682278 ~ 61686308 (-) True G68736
TU76326 other upstream 1765198 61981731 ~ 61982395 (-) True LOC110526417
TU76624 other upstream 2194989 62411522 ~ 62418296 (-) True G69210
TU77510 other upstream 3060675 63277208 ~ 63277752 (-) True G70013

Expression Profile