RNA id: TU81637



Basic Information


Item Value
RNA id TU81637
length 322
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G73856
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 66275755 ~ 66276076 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ccattgaatgtatatgttctgaccatgacagtttacaatctaaggtaacacctagtcttttagtctcctcaacttgttcaacagccacaccattcattaccagattcagctgaggtctagaacttaggtaatgatttgtaccaaatacaatgctcttagttttaaagatgttcaggaccagtttattactggccacccattccaaaacagactgcaactctttgttaagagtttcagtgacttcattagctgtggttgctgatgcgtacatggttgaatcatcagcatacatggacacacatgctttgtttaatgccagtgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU81624 lncRNA downstream 24448 66251069 ~ 66251307 (-) True G73843
TU81443 lncRNA downstream 170772 66018762 ~ 66104983 (-) False G73678
TU81445 lncRNA downstream 225876 66018762 ~ 66049879 (-) True G73678
TU81476 lncRNA downstream 228597 66046509 ~ 66047158 (-) True G73707
TU81440 lncRNA downstream 256709 66014065 ~ 66019046 (-) False G73678
TU81638 lncRNA upstream 797 66276873 ~ 66277185 (-) True G73857
TU81639 lncRNA upstream 1784 66277860 ~ 66278075 (-) True G73858
TU81642 lncRNA upstream 11523 66287599 ~ 66288045 (-) True G73861
TU81643 lncRNA upstream 13857 66289933 ~ 66290241 (-) True G73862
TU81491 lncRNA upstream 59219 66335295 ~ 66339981 (-) True G73719
XM_021608363.2 mRNA downstream 25033 66215269 ~ 66250722 (-) True pkdcca
XM_036983010.1 mRNA downstream 134529 66021021 ~ 66141226 (-) True LOC110527186
LOC110527194 mRNA downstream 189674 66085450 ~ 66086081 (-) True LOC110527194
XM_036983007.1 mRNA downstream 191291 66021021 ~ 66084464 (-) False LOC110527186
XM_036983014.1 mRNA downstream 191292 66021021 ~ 66084463 (-) False LOC110527186
XM_036983031.1 mRNA upstream 85122 66361198 ~ 66402068 (-) False ubr2
XM_036983041.1 mRNA upstream 85122 66361198 ~ 66402068 (-) False ubr2
XM_036983038.1 mRNA upstream 85122 66361198 ~ 66402069 (-) True ubr2
XM_021608387.2 mRNA upstream 127331 66403407 ~ 66426637 (-) False LOC110527220
XM_021608393.2 mRNA upstream 127331 66403407 ~ 66426637 (-) False LOC110527220
TU78947 other downstream 1894399 64369902 ~ 64381356 (-) True LOC110526867
TU77510 other downstream 2998003 63277208 ~ 63277752 (-) True G70013
TU76624 other downstream 3857459 62411522 ~ 62418296 (-) True G69210
TU76326 other downstream 4293360 61981731 ~ 61982395 (-) True LOC110526417
TU76069 other downstream 4589447 61682278 ~ 61686308 (-) True G68736
TU82292 other upstream 542768 66818844 ~ 66822816 (-) False tjap1
TU82368 other upstream 718606 66994682 ~ 67010587 (-) True LOC110527436
TU83185 other upstream 1110433 67386509 ~ 67388044 (-) True LOC110527584
TU83338 other upstream 1393513 67669589 ~ 67681730 (-) False LOC110527687
TU83339 other upstream 1393513 67669589 ~ 67681730 (-) True LOC110527687

Expression Profile