RNA id: TU82618



Basic Information


Item Value
RNA id TU82618
length 271
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G74739
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 67329735 ~ 67330005 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GCACTGGGAGGATGTCAAGGAGCATATGCGTTACATTAGGGAGCAACTGTTTCACCTCGGGGAGGGATTGGAGGTCGTAGATCCAACCAGGCTACTTCTGTTCCCCCTGTCAGAGGACTGCACGCCCCACTGCACAGCCACATAGGCTACCCTCTTTGGAGGCTCACAACAGAGACACTCAGGAACACAGGCCAATGCTACTCTGAGCATGGATGGTCGAAGATGGCGATGCACTCTGACATCTCTGTCAGACAATCCAGTTCAGCCACGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU82593 lncRNA downstream 30764 67298230 ~ 67298971 (-) True G74715
TU82589 lncRNA downstream 36366 67293136 ~ 67293369 (-) True G74711
TU82577 lncRNA downstream 57779 67271734 ~ 67271956 (-) True G74699
TU82571 lncRNA downstream 92168 67237109 ~ 67237567 (-) True G74693
TU82570 lncRNA downstream 93408 67236116 ~ 67236327 (-) True G74692
TU83134 lncRNA upstream 7147 67337152 ~ 67337527 (-) True G75208
TU83140 lncRNA upstream 13973 67343978 ~ 67344526 (-) True G75214
TU83158 lncRNA upstream 34850 67364855 ~ 67365094 (-) True G75231
TU83159 lncRNA upstream 35597 67365602 ~ 67365808 (-) True G75232
TU83164 lncRNA upstream 36868 67366873 ~ 67368104 (-) True G75233
XM_021608848.2 mRNA downstream 38517 67288562 ~ 67291218 (-) False LOC110527518
XM_021608857.2 mRNA downstream 38517 67289246 ~ 67291218 (-) True LOC110527518
XM_021608834.2 mRNA downstream 58496 67252292 ~ 67271239 (-) True acss1
XM_021608822.2 mRNA downstream 94301 67226729 ~ 67235434 (-) True LOC110527505
XM_021608803.2 mRNA downstream 193946 67070153 ~ 67135789 (-) True LOC110527477
XM_021608968.2 mRNA upstream 56742 67386747 ~ 67387983 (-) False LOC110527584
XM_021608984.2 mRNA upstream 56742 67386747 ~ 67387998 (-) False LOC110527584
XM_021608976.2 mRNA upstream 56742 67386747 ~ 67389299 (-) False LOC110527584
XM_021608934.2 mRNA upstream 85734 67415739 ~ 67443275 (-) False abhd12
XM_021608942.2 mRNA upstream 85849 67415854 ~ 67443770 (-) True abhd12
TU82368 other downstream 319148 66994682 ~ 67010587 (-) True LOC110527436
TU82292 other downstream 506919 66818844 ~ 66822816 (-) False tjap1
TU78947 other downstream 2948379 64369902 ~ 64381356 (-) True LOC110526867
TU77510 other downstream 4051983 63277208 ~ 63277752 (-) True G70013
TU76624 other downstream 4911439 62411522 ~ 62418296 (-) True G69210
TU83185 other upstream 56504 67386509 ~ 67388044 (-) True LOC110527584
TU83338 other upstream 339584 67669589 ~ 67681730 (-) False LOC110527687
TU83339 other upstream 339584 67669589 ~ 67681730 (-) True LOC110527687
TU83574 other upstream 827956 68157961 ~ 68162002 (-) True sdhaf4
TU83653 other upstream 880175 68210180 ~ 68211706 (-) True G75682

Expression Profile