RNA id: TU83746



Basic Information


Item Value
RNA id TU83746
length 233
lncRNA type antisense_over
GC content 0.50
exon number 2
gene id G75764
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 68232232 ~ 68285627 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtctgtctgtctgtgtgtctgtgtgtctgtgtgtctgtgtgtctgtctgtgtgtgtgtctgtctgtgtgtctgtgtgtctgtctgtgtgtgtgtctgtgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU83636 lncRNA downstream 25100 68206816 ~ 68207132 (-) True G75665
TU83635 lncRNA downstream 26172 68205844 ~ 68206060 (-) True G75664
TU83578 lncRNA downstream 89752 68138795 ~ 68142480 (-) True G75612
TU83499 lncRNA downstream 240204 67985167 ~ 67992028 (-) True G75539
TU83444 lncRNA downstream 279515 67897706 ~ 67952717 (-) True LOC110532597
TU83845 lncRNA upstream 85111 68370738 ~ 68370943 (-) True G75846
TU83847 lncRNA upstream 86815 68372442 ~ 68372903 (-) True G75848
TU83852 lncRNA upstream 91628 68377255 ~ 68377755 (-) True G75852
TU83854 lncRNA upstream 94316 68379943 ~ 68380183 (-) True G75854
TU83921 lncRNA upstream 149938 68435565 ~ 68437455 (-) True G75916
XM_021609385.2 mRNA downstream 13690 68215999 ~ 68218542 (-) True lbx1a
XM_021609374.2 mRNA downstream 63275 68162832 ~ 68168957 (-) True tlx1
XM_021609364.2 mRNA downstream 63594 68162832 ~ 68168638 (-) False tlx1
XM_021609351.2 mRNA downstream 70208 68157900 ~ 68162024 (-) False sdhaf4
XM_021609322.2 mRNA downstream 80216 68142952 ~ 68152016 (-) True LOC110527795
NM_001124747.1 mRNA upstream 115955 68401582 ~ 68404726 (-) True cyp17a1
XM_021609455.2 mRNA upstream 123886 68409513 ~ 68433891 (-) False nt5c2a
XM_021609462.2 mRNA upstream 123886 68409513 ~ 68433891 (-) False nt5c2a
XM_036983613.1 mRNA upstream 123886 68409513 ~ 68433891 (-) True nt5c2a
XM_021609486.2 mRNA upstream 152446 68438073 ~ 68444855 (-) True pcgf6
TU83653 other downstream 20526 68210180 ~ 68211706 (-) True G75682
TU83574 other downstream 70230 68157961 ~ 68162002 (-) True sdhaf4
TU83338 other downstream 550502 67669589 ~ 67681730 (-) False LOC110527687
TU83339 other downstream 550502 67669589 ~ 67681730 (-) True LOC110527687
TU83185 other downstream 844188 67386509 ~ 67388044 (-) True LOC110527584
TU84158 other upstream 289966 68575593 ~ 68577744 (-) False LOC110527951
TU84152 other upstream 353749 68639376 ~ 68690229 (-) True LOC110527951
TU86507 other upstream 1797213 70082840 ~ 70085385 (-) False LOC118965321
TU86508 other upstream 1797213 70082840 ~ 70085385 (-) False LOC118965321
TU86509 other upstream 1797213 70082840 ~ 70085009 (-) False LOC118965321

Expression Profile