Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU85396 |
| length | 249 |
| lncRNA type | intronic |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G77235 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 69303752 ~ 69304024 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU85226 | lncRNA | downstream | 208627 | 69082178 ~ 69095125 (-) | True | shtn1 |
| TU84570 | lncRNA | downstream | 363997 | 68939536 ~ 68939755 (-) | True | G76500 |
| TU84568 | lncRNA | downstream | 365670 | 68931237 ~ 68938082 (-) | True | G76499 |
| TU84531 | lncRNA | downstream | 381807 | 68909178 ~ 68921945 (-) | True | LOC110528072 |
| TU84561 | lncRNA | downstream | 402874 | 68900628 ~ 68900878 (-) | True | G76492 |
| TU85438 | lncRNA | upstream | 60207 | 69364231 ~ 69364549 (-) | True | G77276 |
| TU85439 | lncRNA | upstream | 61587 | 69365611 ~ 69366130 (-) | True | G77277 |
| TU85441 | lncRNA | upstream | 65248 | 69369272 ~ 69369557 (-) | True | G77279 |
| TU85446 | lncRNA | upstream | 68551 | 69372575 ~ 69372793 (-) | True | G77284 |
| TU85533 | lncRNA | upstream | 206239 | 69510263 ~ 69539584 (-) | True | G77365 |
| XM_021609940.2 | mRNA | downstream | 124189 | 69169520 ~ 69179563 (-) | False | vax1 |
| XM_021609946.2 | mRNA | downstream | 124189 | 69169520 ~ 69179563 (-) | True | vax1 |
| XM_021609923.2 | mRNA | downstream | 162658 | 69096881 ~ 69141094 (-) | True | atp6v1ba |
| XM_021609902.2 | mRNA | downstream | 208518 | 69046945 ~ 69095234 (-) | False | shtn1 |
| XM_021609890.2 | mRNA | downstream | 208523 | 69046945 ~ 69095229 (-) | False | shtn1 |
| XM_021610006.2 | mRNA | upstream | 82212 | 69386236 ~ 69400573 (-) | True | si:ch211-125o16.4 |
| XR_005052655.1 | mRNA | upstream | 117043 | 69421067 ~ 69432188 (-) | True | LOC118965314 |
| XM_021610053.2 | mRNA | upstream | 133298 | 69437322 ~ 69445652 (-) | False | exo1 |
| XM_036983973.1 | mRNA | upstream | 133298 | 69437322 ~ 69445678 (-) | False | exo1 |
| XM_021610045.2 | mRNA | upstream | 133298 | 69437322 ~ 69445733 (-) | True | exo1 |
| TU84152 | other | downstream | 613523 | 68639376 ~ 68690229 (-) | True | LOC110527951 |
| TU84158 | other | downstream | 726008 | 68575593 ~ 68577744 (-) | False | LOC110527951 |
| TU83653 | other | downstream | 1092046 | 68210180 ~ 68211706 (-) | True | G75682 |
| TU83574 | other | downstream | 1141750 | 68157961 ~ 68162002 (-) | True | sdhaf4 |
| TU83339 | other | downstream | 1622022 | 67669589 ~ 67681730 (-) | True | LOC110527687 |
| TU86507 | other | upstream | 778816 | 70082840 ~ 70085385 (-) | False | LOC118965321 |
| TU86508 | other | upstream | 778816 | 70082840 ~ 70085385 (-) | False | LOC118965321 |
| TU86509 | other | upstream | 778816 | 70082840 ~ 70085009 (-) | False | LOC118965321 |
| TU86510 | other | upstream | 781914 | 70085938 ~ 70087657 (-) | False | LOC118965321 |
| TU86511 | other | upstream | 781914 | 70085938 ~ 70088714 (-) | True | LOC118965321 |
