RNA id: TU91603


Basic Information

Item Value
RNA id TU91603
length 211
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G82987
representative True

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 74242935 ~ 74243145 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cattttgaatgcttagcaggacaggaaaattgttcaattcacacacttatcaagacaacacatggtcatccattctgcctctgatctgggggagtCACTAATCACAAACGCATcttttgtaaatgatatctgagtgttgggagtgtgcccctggctatccatacattttaaaaacaagaaaatggttctGCCTGCATTGCATGATTTATAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91600 lncRNA downstream 1373 74241358 ~ 74241562 (-) True G82984
TU91596 lncRNA downstream 3751 74238976 ~ 74239184 (-) True G82980
TU91583 lncRNA downstream 16178 74225622 ~ 74226757 (-) True G82968
TU91580 lncRNA downstream 25285 74217379 ~ 74217650 (-) True G82966
TU91577 lncRNA downstream 28751 74213870 ~ 74214184 (-) True G82963
TU91624 lncRNA upstream 11024 74254169 ~ 74254419 (-) True G83008
TU91737 lncRNA upstream 14573 74257718 ~ 74257956 (-) True G83111
TU91760 lncRNA upstream 53885 74297030 ~ 74297734 (-) True G83134
TU91770 lncRNA upstream 69358 74312503 ~ 74314710 (-) True G83143
TU91801 lncRNA upstream 107148 74350293 ~ 74350503 (-) True G83172
XM_021611333.2 mRNA downstream 8818 74229248 ~ 74234117 (-) True LOC110529206
NM_001160549.1 mRNA downstream 53254 74183813 ~ 74189681 (-) True smndc1
XR_002474341.2 mRNA downstream 156964 74082939 ~ 74085971 (-) False LOC110529148
XM_021611387.2 mRNA upstream 105645 74348790 ~ 74378154 (-) False mgmt
XM_021611379.2 mRNA upstream 116595 74359740 ~ 74378153 (-) True mgmt
NM_001124280.1 mRNA upstream 234026 74477171 ~ 74478278 (-) False gnrh3
XM_021611412.2 mRNA upstream 236793 74479938 ~ 74497600 (-) False LOC110529277
XM_021611396.2 mRNA upstream 236793 74479938 ~ 74531625 (-) False LOC110529277
TU89447 other downstream 1991017 72248604 ~ 72251918 (-) True LOC110528794
TU89450 other downstream 2031846 72207929 ~ 72211089 (-) True G80957
TU88304 other downstream 2499126 71743045 ~ 71743809 (-) True G79904
TU88097 other downstream 2772476 71469682 ~ 71470459 (-) True G79700
TU88009 other downstream 2856412 71376285 ~ 71386523 (-) True G79616
TU92060 other upstream 329302 74572447 ~ 74572789 (-) True G83429
TU92810 other upstream 729067 74972212 ~ 74973321 (-) True fank1
TU93438 other upstream 1285198 75528343 ~ 75528903 (-) True G84713
TU94659 other upstream 2090323 76333468 ~ 76334136 (-) True G85866
TU94594 other upstream 2124148 76367293 ~ 76399956 (-) True ccser2a

Expression Profile