RNA id: TU92064


Basic Information

Item Value
RNA id TU92064
length 203
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G83433
representative True

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 74575152 ~ 74575354 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cttctgtaaagcccagctctgtggagtgcacggcttaaagtggtcctatggacagatactccaatctccgctgtggagctttgcagctccttcagggttatctttggtctatTTGTTGCCTCTATGTTTAATTCCCTCCTtacctggtccatgagttttggtgggcggccctcccttggcaggtttgttatggtgccatattc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92059 lncRNA downstream 3621 74571216 ~ 74571531 (-) True G83428
TU92058 lncRNA downstream 4024 74570846 ~ 74571128 (-) True G83427
TU91965 lncRNA downstream 43584 74504875 ~ 74531568 (-) True LOC110529277
TU91971 lncRNA downstream 84858 74490086 ~ 74490294 (-) True G83341
TU91970 lncRNA downstream 85558 74489363 ~ 74489594 (-) True G83340
TU92099 lncRNA upstream 22622 74597976 ~ 74598234 (-) True G83468
TU92108 lncRNA upstream 26529 74601883 ~ 74602105 (-) True G83477
TU92137 lncRNA upstream 45249 74620603 ~ 74620830 (-) True G83504
TU92310 lncRNA upstream 159014 74734368 ~ 74734914 (-) True G83674
TU92354 lncRNA upstream 189250 74764604 ~ 74765058 (-) True G83718
XM_021611396.2 mRNA downstream 43527 74479938 ~ 74531625 (-) False LOC110529277
XM_021611404.2 mRNA downstream 43527 74479938 ~ 74531625 (-) False LOC110529277
XM_021611412.2 mRNA downstream 77552 74479938 ~ 74497600 (-) False LOC110529277
NM_001124280.1 mRNA downstream 96874 74477171 ~ 74478278 (-) False gnrh3
XM_021611379.2 mRNA downstream 196999 74359740 ~ 74378153 (-) True mgmt
XM_021611433.2 mRNA upstream 133976 74709330 ~ 74728846 (-) True LOC110529307
XM_021611491.2 mRNA upstream 396418 74971772 ~ 74975108 (-) False fank1
XM_036985291.1 mRNA upstream 406902 74982256 ~ 74996768 (-) False edrf1
XM_036985292.1 mRNA upstream 406902 74982256 ~ 74996768 (-) False edrf1
XM_036985296.1 mRNA upstream 406902 74982256 ~ 74996768 (-) False edrf1
TU92060 other downstream 2363 74572447 ~ 74572789 (-) True G83429
TU89447 other downstream 2323234 72248604 ~ 72251918 (-) True LOC110528794
TU89450 other downstream 2364063 72207929 ~ 72211089 (-) True G80957
TU88304 other downstream 2831343 71743045 ~ 71743809 (-) True G79904
TU88097 other downstream 3104693 71469682 ~ 71470459 (-) True G79700
TU92810 other upstream 396858 74972212 ~ 74973321 (-) True fank1
TU93438 other upstream 952989 75528343 ~ 75528903 (-) True G84713
TU94659 other upstream 1758114 76333468 ~ 76334136 (-) True G85866
TU94594 other upstream 1791939 76367293 ~ 76399956 (-) True ccser2a
TU94870 other upstream 1945731 76521085 ~ 76523481 (-) True G86063

Expression Profile