RNA id: TU92099


Basic Information

Item Value
RNA id TU92099
length 259
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G83468
representative True

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 74597976 ~ 74598234 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ttggtgtgctgagtctttttttctccatacatagtattgtgtgttccttccaaacaactcaactgtagtttcatttgtccacagaatattttgccagtagcgctgtggaacatccaagtgcacttttgcaaacttcagacgtgcagcaatgttttttttgtacagcagtggcttcttccgtggtgtcctcccataaacaccattcttgtttagtgtttaacGTATTGTAGACTTgccaacagagatgttagcatcttcc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92064 lncRNA downstream 22622 74575152 ~ 74575354 (-) True G83433
TU92059 lncRNA downstream 26445 74571216 ~ 74571531 (-) True G83428
TU92058 lncRNA downstream 26848 74570846 ~ 74571128 (-) True G83427
TU91965 lncRNA downstream 66408 74504875 ~ 74531568 (-) True LOC110529277
TU91971 lncRNA downstream 107682 74490086 ~ 74490294 (-) True G83341
TU92108 lncRNA upstream 3649 74601883 ~ 74602105 (-) True G83477
TU92137 lncRNA upstream 22369 74620603 ~ 74620830 (-) True G83504
TU92310 lncRNA upstream 136134 74734368 ~ 74734914 (-) True G83674
TU92354 lncRNA upstream 166370 74764604 ~ 74765058 (-) True G83718
TU92372 lncRNA upstream 182083 74780317 ~ 74780539 (-) True G83736
XM_021611396.2 mRNA downstream 66351 74479938 ~ 74531625 (-) False LOC110529277
XM_021611404.2 mRNA downstream 66351 74479938 ~ 74531625 (-) False LOC110529277
XM_021611412.2 mRNA downstream 100376 74479938 ~ 74497600 (-) False LOC110529277
NM_001124280.1 mRNA downstream 119698 74477171 ~ 74478278 (-) False gnrh3
XM_021611379.2 mRNA downstream 219823 74359740 ~ 74378153 (-) True mgmt
XM_021611433.2 mRNA upstream 111096 74709330 ~ 74728846 (-) True LOC110529307
XM_021611491.2 mRNA upstream 373538 74971772 ~ 74975108 (-) False fank1
XM_036985291.1 mRNA upstream 384022 74982256 ~ 74996768 (-) False edrf1
XM_036985292.1 mRNA upstream 384022 74982256 ~ 74996768 (-) False edrf1
XM_036985296.1 mRNA upstream 384022 74982256 ~ 74996768 (-) False edrf1
TU92060 other downstream 25187 74572447 ~ 74572789 (-) True G83429
TU89447 other downstream 2346058 72248604 ~ 72251918 (-) True LOC110528794
TU89450 other downstream 2386887 72207929 ~ 72211089 (-) True G80957
TU88304 other downstream 2854167 71743045 ~ 71743809 (-) True G79904
TU88097 other downstream 3127517 71469682 ~ 71470459 (-) True G79700
TU92810 other upstream 373978 74972212 ~ 74973321 (-) True fank1
TU93438 other upstream 930109 75528343 ~ 75528903 (-) True G84713
TU94659 other upstream 1735234 76333468 ~ 76334136 (-) True G85866
TU94594 other upstream 1769059 76367293 ~ 76399956 (-) True ccser2a
TU94870 other upstream 1922851 76521085 ~ 76523481 (-) True G86063

Expression Profile