RNA id: TU92137


Basic Information

Item Value
RNA id TU92137
length 228
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G83504
representative True

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 74620603 ~ 74620830 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ctcataggatgccacctttccaacaagtcagttagtcaaattcctgccctgctagagctgccccggtcaactataagtgctgttattgtgaagtggaaatgtctaggagcaacaccaGCTCAACcacgaagtggtagaccacacaagctcacagaatgggaccgtcaaatgctgaagcgcgtagcgcatAAAAATTGCTTATCATCTGTTGCAACACTTACAACCGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92108 lncRNA downstream 18498 74601883 ~ 74602105 (-) True G83477
TU92099 lncRNA downstream 22369 74597976 ~ 74598234 (-) True G83468
TU92064 lncRNA downstream 45249 74575152 ~ 74575354 (-) True G83433
TU92059 lncRNA downstream 49072 74571216 ~ 74571531 (-) True G83428
TU92058 lncRNA downstream 49475 74570846 ~ 74571128 (-) True G83427
TU92310 lncRNA upstream 113538 74734368 ~ 74734914 (-) True G83674
TU92354 lncRNA upstream 143774 74764604 ~ 74765058 (-) True G83718
TU92372 lncRNA upstream 159487 74780317 ~ 74780539 (-) True G83736
TU92686 lncRNA upstream 177873 74798703 ~ 74799905 (-) True G84015
TU92693 lncRNA upstream 190342 74811172 ~ 74812111 (-) False G84020
XM_021611396.2 mRNA downstream 88978 74479938 ~ 74531625 (-) False LOC110529277
XM_021611404.2 mRNA downstream 88978 74479938 ~ 74531625 (-) False LOC110529277
XM_021611412.2 mRNA downstream 123003 74479938 ~ 74497600 (-) False LOC110529277
NM_001124280.1 mRNA downstream 142325 74477171 ~ 74478278 (-) False gnrh3
XM_021611379.2 mRNA downstream 242450 74359740 ~ 74378153 (-) True mgmt
XM_021611433.2 mRNA upstream 88500 74709330 ~ 74728846 (-) True LOC110529307
XM_021611491.2 mRNA upstream 350942 74971772 ~ 74975108 (-) False fank1
XM_036985291.1 mRNA upstream 361426 74982256 ~ 74996768 (-) False edrf1
XM_036985292.1 mRNA upstream 361426 74982256 ~ 74996768 (-) False edrf1
XM_036985296.1 mRNA upstream 361426 74982256 ~ 74996768 (-) False edrf1
TU92060 other downstream 47814 74572447 ~ 74572789 (-) True G83429
TU89447 other downstream 2368685 72248604 ~ 72251918 (-) True LOC110528794
TU89450 other downstream 2409514 72207929 ~ 72211089 (-) True G80957
TU88304 other downstream 2876794 71743045 ~ 71743809 (-) True G79904
TU88097 other downstream 3150144 71469682 ~ 71470459 (-) True G79700
TU92810 other upstream 351382 74972212 ~ 74973321 (-) True fank1
TU93438 other upstream 907513 75528343 ~ 75528903 (-) True G84713
TU94659 other upstream 1712638 76333468 ~ 76334136 (-) True G85866
TU94594 other upstream 1746463 76367293 ~ 76399956 (-) True ccser2a
TU94870 other upstream 1900255 76521085 ~ 76523481 (-) True G86063

Expression Profile