RNA id: TU93244



Basic Information


Item Value
RNA id TU93244
length 214
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G84546
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 75412837 ~ 75413050 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


aggaagaagccactgctccaaaacctccataaaaaagccagattacggtttgcaactgcacatggggacaagatcgtactttttggagaaatgtcctctggtctgatgaagcaaaaatagaactgtttggccgtaatgaccatcgttatgtctggtggaaaaagggggacgcttgcaaggcaaagaacaccatcccaaccgtaaagcacggggg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93216 lncRNA downstream 18161 75394443 ~ 75394676 (-) True G84518
TU93208 lncRNA downstream 27318 75385307 ~ 75385519 (-) True G84510
TU93104 lncRNA downstream 156520 75256005 ~ 75256317 (-) True G84407
TU93019 lncRNA downstream 173421 75238675 ~ 75239416 (-) True G84325
TU92999 lncRNA downstream 186812 75225712 ~ 75226025 (-) True G84305
TU93249 lncRNA upstream 1280 75414330 ~ 75414666 (-) True G84551
TU93426 lncRNA upstream 109245 75522295 ~ 75522527 (-) True G84701
TU93429 lncRNA upstream 111016 75524066 ~ 75524276 (-) True G84704
TU93442 lncRNA upstream 119218 75532268 ~ 75532479 (-) True G84717
TU93446 lncRNA upstream 122015 75535065 ~ 75535397 (-) True G84721
XM_021600288.2 mRNA downstream 64493 75345113 ~ 75348344 (-) True LOC110522123
XM_021611577.2 mRNA downstream 264047 75135079 ~ 75148790 (-) False LOC110529412
XM_036985375.1 mRNA downstream 265045 75135079 ~ 75147792 (-) False LOC110529412
XM_036985373.1 mRNA downstream 279565 75112641 ~ 75133272 (-) True LOC110529369
XM_021611511.2 mRNA downstream 279566 75112641 ~ 75133271 (-) False LOC110529369
XM_021611670.2 mRNA upstream 78966 75492016 ~ 75494664 (-) True LOC110529482
XM_021611685.2 mRNA upstream 87660 75500710 ~ 75503281 (-) True LOC110529484
XM_021611717.2 mRNA upstream 143095 75556145 ~ 75574946 (-) True LOC110529486
XM_021611729.2 mRNA upstream 196297 75609347 ~ 75612396 (-) True vkorc1
XM_036985519.1 mRNA upstream 911481 76324531 ~ 76399997 (-) False ccser2a
TU92810 other downstream 439516 74972212 ~ 74973321 (-) True fank1
TU92060 other downstream 840048 74572447 ~ 74572789 (-) True G83429
TU89447 other downstream 3160919 72248604 ~ 72251918 (-) True LOC110528794
TU89450 other downstream 3201748 72207929 ~ 72211089 (-) True G80957
TU88304 other downstream 3669028 71743045 ~ 71743809 (-) True G79904
TU93438 other upstream 115293 75528343 ~ 75528903 (-) True G84713
TU94659 other upstream 920418 76333468 ~ 76334136 (-) True G85866
TU94594 other upstream 954243 76367293 ~ 76399956 (-) True ccser2a
TU94870 other upstream 1108035 76521085 ~ 76523481 (-) True G86063
TU94946 other upstream 1193632 76606682 ~ 76608354 (-) True G86132

Expression Profile