RNA id: TU94156



Basic Information


Item Value
RNA id TU94156
length 206
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G85386
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 76247192 ~ 76247397 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTCCTATCATCAGATATAATGTCCcagacaacaactgatctgacatcatattctttaagtaccaaaGGACACGTTCAACTGATTGAGAAAGGGAAATATTGTTCCATTCCCAAACCTTTTGATGTTATCATACTTTCTCTGTGGTAACAGGGCTTTCCAAGAGTCAATTCtgtagagtggagagaaaagggggaaaggtatttatg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU94153 lncRNA upstream 3446 76243538 ~ 76243746 (+) True G85383
TU94144 lncRNA upstream 17314 76229595 ~ 76229878 (+) True G85374
TU94143 lncRNA upstream 17837 76229132 ~ 76229355 (+) True G85373
TU94071 lncRNA upstream 130953 76115677 ~ 76116239 (+) True G85303
TU93708 lncRNA upstream 461246 75785680 ~ 75785946 (+) True G84962
TU94161 lncRNA downstream 5998 76253395 ~ 76253632 (+) True G85391
TU94185 lncRNA downstream 32953 76280350 ~ 76280584 (+) True G85413
TU94203 lncRNA downstream 52729 76300126 ~ 76300492 (+) True G85431
TU94204 lncRNA downstream 53401 76300798 ~ 76301289 (+) True G85432
TU94221 lncRNA downstream 82831 76330228 ~ 76332586 (+) True G85449
XM_036985516.1 mRNA upstream 69214 75833931 ~ 76177978 (+) True LOC110532683
XM_021611780.2 mRNA upstream 523039 75695434 ~ 75724153 (+) False LOC110529516
XM_021600418.2 mRNA downstream 156784 76404181 ~ 76416951 (+) True LOC110522192
XM_021611837.2 mRNA downstream 173030 76420427 ~ 76433438 (+) False LOC110529556
XM_021611846.2 mRNA downstream 173030 76420427 ~ 76433438 (+) False LOC110529556
XM_021611876.2 mRNA downstream 178250 76425647 ~ 76433438 (+) False LOC110529556
XM_036985595.1 mRNA downstream 178250 76425647 ~ 76433438 (+) False LOC110529556
TU92648 other upstream 1101680 75144864 ~ 75145512 (+) True G83979
TU92479 other upstream 1133002 75112660 ~ 75114190 (+) True G83829
TU92487 other upstream 1337386 74909225 ~ 74909806 (+) True G83836
TU90667 other upstream 2675455 73551616 ~ 73571737 (+) False G82111
TU94291 other downstream 210727 76458124 ~ 76459823 (+) True LOC110529610
TU94822 other downstream 384348 76631745 ~ 76635936 (+) True G86019
TU95475 other downstream 876538 77123935 ~ 77124427 (+) True G86614
TU96076 other downstream 1322618 77570015 ~ 77570470 (+) True G87159
TU98716 other downstream 3301620 79549017 ~ 79549651 (+) True G89667

Expression Profile