RNA id: TU94230



Basic Information


Item Value
RNA id TU94230
length 437
lncRNA type antisense_over
GC content 0.52
exon number 2
gene id G85458
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 76343747 ~ 76344203 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GAAAGAATAAGCGAGAATGACAAATACAGAGGTAGAAAGATAAAAGAGGTAGCCACTACACCTGCCttgtgtgtagatggctgagggctgagggctgacggcttctctcaaacacacagacagtctcACTGTCCATTAAGTGGTTCCACCATTTAGGACAAtggtgatggggtgggggatcTGGAGGTGTGGTACCAGTGAGTAAGTTGAATGTGAGGAAGGGGACTATAGGTGATGGACTGACAGATGGACAGATGAGACTGGCTGTGGGTCTCCGTTCTCCAGGTATATATTATACAGGTGTACTCACGGCATGGCTGTTTCCTTGTCCTCTCCAGGGGGTCTGTGTGGCCTTGTCTTGGTgcgtctgtctgtcctcttccaGCGACGGTGCCCTCTGGTGACAGTGACAGCTCCCAGGCTGGTCAGCGTGAGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU94223 lncRNA upstream 8795 76334664 ~ 76334952 (+) True G85451
TU94222 lncRNA upstream 10539 76332924 ~ 76333208 (+) True G85450
TU94221 lncRNA upstream 11161 76330228 ~ 76332586 (+) True G85449
TU94204 lncRNA upstream 42458 76300798 ~ 76301289 (+) True G85432
TU94203 lncRNA upstream 43255 76300126 ~ 76300492 (+) True G85431
TU94285 lncRNA downstream 82718 76426921 ~ 76429453 (+) True LOC110529556
TU94297 lncRNA downstream 104847 76449050 ~ 76449561 (+) True G85519
TU94299 lncRNA downstream 106523 76450726 ~ 76450936 (+) True G85521
TU94300 lncRNA downstream 107468 76451671 ~ 76452154 (+) True G85522
TU94303 lncRNA downstream 122000 76466203 ~ 76466666 (+) True G85525
XM_036985516.1 mRNA upstream 165769 75833931 ~ 76177978 (+) True LOC110532683
XM_021611780.2 mRNA upstream 619594 75695434 ~ 75724153 (+) False LOC110529516
XM_021600418.2 mRNA downstream 59978 76404181 ~ 76416951 (+) True LOC110522192
XM_021611837.2 mRNA downstream 76224 76420427 ~ 76433438 (+) False LOC110529556
XM_021611846.2 mRNA downstream 76224 76420427 ~ 76433438 (+) False LOC110529556
XM_021611876.2 mRNA downstream 81444 76425647 ~ 76433438 (+) False LOC110529556
XM_036985595.1 mRNA downstream 81444 76425647 ~ 76433438 (+) False LOC110529556
TU92648 other upstream 1198235 75144864 ~ 75145512 (+) True G83979
TU92479 other upstream 1229557 75112660 ~ 75114190 (+) True G83829
TU92487 other upstream 1433941 74909225 ~ 74909806 (+) True G83836
TU90667 other upstream 2772010 73551616 ~ 73571737 (+) False G82111
TU94291 other downstream 113921 76458124 ~ 76459823 (+) True LOC110529610
TU94822 other downstream 287542 76631745 ~ 76635936 (+) True G86019
TU95475 other downstream 779732 77123935 ~ 77124427 (+) True G86614
TU96076 other downstream 1225812 77570015 ~ 77570470 (+) True G87159
TU98716 other downstream 3204814 79549017 ~ 79549651 (+) True G89667

Expression Profile