Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU99248 |
| length | 201 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G90117 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 79580371 ~ 79580571 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU99235 | lncRNA | downstream | 9343 | 79570814 ~ 79571028 (-) | True | G90104 |
| TU99218 | lncRNA | downstream | 22552 | 79557337 ~ 79557819 (-) | True | G90094 |
| TU99216 | lncRNA | downstream | 24048 | 79556102 ~ 79556323 (-) | True | G90092 |
| TU99213 | lncRNA | downstream | 29092 | 79550836 ~ 79551279 (-) | True | G90089 |
| TU99198 | lncRNA | downstream | 45897 | 79534219 ~ 79534474 (-) | True | G90080 |
| TU99263 | lncRNA | upstream | 17539 | 79598110 ~ 79598473 (-) | True | G90132 |
| TU99268 | lncRNA | upstream | 24436 | 79605007 ~ 79605280 (-) | True | G90137 |
| TU99342 | lncRNA | upstream | 97285 | 79677856 ~ 79738682 (-) | True | G90205 |
| TU99311 | lncRNA | upstream | 282865 | 79863436 ~ 79867775 (-) | False | LOC110530200 |
| TU99403 | lncRNA | upstream | 345644 | 79926215 ~ 79928905 (-) | True | G90260 |
| XM_021612995.2 | mRNA | downstream | 85201 | 79361597 ~ 79495170 (-) | True | LOC110530138 |
| XM_021612985.2 | mRNA | downstream | 132129 | 79361597 ~ 79448242 (-) | False | LOC110530138 |
| XR_005052954.1 | mRNA | downstream | 228967 | 79273232 ~ 79351404 (-) | False | LOC110530112 |
| XR_005052955.1 | mRNA | downstream | 228967 | 79273232 ~ 79351404 (-) | True | LOC110530112 |
| XM_021612948.2 | mRNA | downstream | 228969 | 79257290 ~ 79351402 (-) | False | LOC110530112 |
| XM_036986287.1 | mRNA | upstream | 32066 | 79612637 ~ 79691783 (-) | False | LOC100136270 |
| XM_021613015.2 | mRNA | upstream | 32066 | 79612637 ~ 79692579 (-) | True | LOC100136270 |
| XR_005052966.1 | mRNA | upstream | 281510 | 79862081 ~ 79870881 (-) | False | LOC110530200 |
| XR_005052965.1 | mRNA | upstream | 281510 | 79862081 ~ 79870883 (-) | False | LOC110530200 |
| XR_005052963.1 | mRNA | upstream | 281510 | 79862081 ~ 79880384 (-) | False | LOC110530200 |
| TU99200 | other | downstream | 44799 | 79534758 ~ 79535572 (-) | True | G90081 |
| TU98450 | other | downstream | 529880 | 79049811 ~ 79050491 (-) | True | G89418 |
| TU96006 | other | downstream | 2100432 | 77478603 ~ 77479939 (-) | True | G87090 |
| TU95290 | other | downstream | 2712773 | 76866904 ~ 76867598 (-) | True | G86448 |
| TU94946 | other | downstream | 2972017 | 76606682 ~ 76608354 (-) | True | G86132 |
| TU99325 | other | upstream | 302966 | 79883537 ~ 79897840 (-) | True | LOC110530200 |
| TU99326 | other | upstream | 306104 | 79886675 ~ 79888180 (-) | True | G90190 |
| TU99544 | other | upstream | 560988 | 80141559 ~ 80142157 (-) | True | G90382 |
| TU101177 | other | upstream | 1360153 | 80940724 ~ 80941674 (-) | True | nphp1 |
| TU101249 | other | upstream | 1447337 | 81027908 ~ 81028612 (-) | True | G91941 |
