Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU100398 |
| length | 218 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G91160 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 80836784 ~ 80837001 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU100385 | lncRNA | downstream | 9847 | 80826728 ~ 80826937 (-) | True | G91147 |
| TU100380 | lncRNA | downstream | 14632 | 80821945 ~ 80822152 (-) | True | G91142 |
| TU100377 | lncRNA | downstream | 17678 | 80818845 ~ 80819106 (-) | True | G91139 |
| TU100365 | lncRNA | downstream | 25328 | 80811232 ~ 80811456 (-) | True | G91127 |
| TU100339 | lncRNA | downstream | 41280 | 80795268 ~ 80795504 (-) | True | G91101 |
| TU100407 | lncRNA | upstream | 4759 | 80841760 ~ 80842051 (-) | True | G91169 |
| TU100436 | lncRNA | upstream | 24803 | 80861804 ~ 80862022 (-) | True | G91198 |
| TU101232 | lncRNA | upstream | 177532 | 81014533 ~ 81015155 (-) | True | G91928 |
| TU101234 | lncRNA | upstream | 179135 | 81016136 ~ 81016356 (-) | True | G91930 |
| TU101236 | lncRNA | upstream | 181819 | 81018820 ~ 81019368 (-) | True | G91932 |
| XM_036986620.1 | mRNA | downstream | 189644 | 80409477 ~ 80647140 (-) | True | slc8a1b |
| XM_036986617.1 | mRNA | downstream | 189645 | 80409477 ~ 80647139 (-) | False | slc8a1b |
| XM_036986571.1 | mRNA | downstream | 459860 | 80364027 ~ 80376924 (-) | True | thumpd2 |
| XM_036986578.1 | mRNA | downstream | 466270 | 80364027 ~ 80370514 (-) | False | thumpd2 |
| XM_021613311.2 | mRNA | downstream | 466271 | 80364027 ~ 80370513 (-) | False | thumpd2 |
| XM_021613366.2 | mRNA | upstream | 66336 | 80903337 ~ 80905779 (-) | True | LOC110530369 |
| XM_036986646.1 | mRNA | upstream | 82947 | 80919948 ~ 80922357 (-) | True | LOC118965579 |
| XM_021613378.2 | mRNA | upstream | 103214 | 80940215 ~ 80966643 (-) | False | nphp1 |
| XM_036986664.1 | mRNA | upstream | 103214 | 80940215 ~ 80966643 (-) | False | nphp1 |
| XM_036986674.1 | mRNA | upstream | 103214 | 80940215 ~ 80966643 (-) | False | nphp1 |
| TU99544 | other | downstream | 694627 | 80141559 ~ 80142157 (-) | True | G90382 |
| TU99325 | other | downstream | 938944 | 79883537 ~ 79897840 (-) | True | LOC110530200 |
| TU99326 | other | downstream | 948604 | 79886675 ~ 79888180 (-) | True | G90190 |
| TU99200 | other | downstream | 1301212 | 79534758 ~ 79535572 (-) | True | G90081 |
| TU98450 | other | downstream | 1786293 | 79049811 ~ 79050491 (-) | True | G89418 |
| TU101177 | other | upstream | 103723 | 80940724 ~ 80941674 (-) | True | nphp1 |
| TU101249 | other | upstream | 190907 | 81027908 ~ 81028612 (-) | True | G91941 |
| TU101251 | other | upstream | 193831 | 81030832 ~ 81031358 (-) | True | G91943 |
| TU101255 | other | upstream | 198574 | 81035575 ~ 81036138 (-) | True | G91947 |
| TU101313 | other | upstream | 343823 | 81180824 ~ 81181463 (-) | False | LOC110532756 |
