RNA id: TU102093


Basic Information

Item Value
RNA id TU102093
length 229
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G92669
representative True

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 82314323 ~ 82314551 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ataaagtagtctacagcactactgccaagagatgagctataggtgtacctaccataggagtcccctcgaagcctaccattgactatgtacatacccagcgtgcgacagagctgcaggagttgtgacccgtttttgttggttatgttgtcatagttgtgcctaggggggcatatgtgggagggaatgctgtcactccatctctctctctgttccctcctctctctgtctc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU102085 lncRNA downstream 12205 82301902 ~ 82302118 (-) True G92661
TU102059 lncRNA downstream 22216 82291777 ~ 82292107 (-) False LOC110532782
TU102053 lncRNA downstream 22803 82246850 ~ 82291520 (-) True G92633
TU102052 lncRNA downstream 42989 82270655 ~ 82271334 (-) True G92632
TU102051 lncRNA downstream 90564 82200416 ~ 82223759 (-) True G92631
TU102062 lncRNA upstream 8354 82322905 ~ 82323402 (-) True G92642
TU102101 lncRNA upstream 16062 82330613 ~ 82330927 (-) True G92677
TU102113 lncRNA upstream 22786 82337337 ~ 82337579 (-) True G92689
TU102116 lncRNA upstream 24458 82339009 ~ 82339245 (-) True G92692
TU102163 lncRNA upstream 54433 82368984 ~ 82369229 (-) True G92737
LOC110532782 mRNA downstream 12456 82291792 ~ 82301867 (-) False LOC110532782
XM_036989948.1 mRNA downstream 25776 82275069 ~ 82288547 (-) True LOC110530601
XM_036989946.1 mRNA downstream 48305 82258046 ~ 82266018 (-) True LOC110532773
XM_036989935.1 mRNA downstream 68691 82232580 ~ 82245632 (-) True LOC118966722
XM_036989927.1 mRNA downstream 95440 82210502 ~ 82218883 (-) True LOC118966721
XM_021613833.2 mRNA upstream 124591 82439142 ~ 82442325 (-) True LOC110530617
XM_036986937.1 mRNA upstream 635058 82949609 ~ 83267157 (-) False LOC100301648
XM_036986941.1 mRNA upstream 635058 82949609 ~ 83267157 (-) False LOC100301648
XM_036986935.1 mRNA upstream 635058 82949609 ~ 83267158 (-) False LOC100301648
XM_036986933.1 mRNA upstream 635058 82949609 ~ 83267159 (-) False LOC100301648
TU102047 other downstream 12476 82295312 ~ 82301847 (-) True LOC110532782
TU102078 other downstream 20020 82293813 ~ 82294303 (-) False LOC110532782
TU101970 other downstream 152580 82160407 ~ 82161743 (-) False G92566
TU101980 other downstream 152580 82160407 ~ 82161743 (-) True G92566
TU101510 other downstream 696999 81607478 ~ 81617324 (-) True LOC110530475
TU103453 other upstream 635063 82949614 ~ 82961322 (-) False LOC100301648
TU103475 other upstream 635063 82949614 ~ 82961322 (-) False LOC100301648
TU103482 other upstream 635063 82949614 ~ 82961322 (-) True LOC100301648
TU103830 other upstream 1169505 83484056 ~ 83485937 (-) True G94201
TU104323 other upstream 1486781 83801332 ~ 83802471 (-) True G94613

Expression Profile