RNA id: TU103753



Basic Information


Item Value
RNA id TU103753
length 247
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G94130
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 83381935 ~ 83382181 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctttactcagtactttgttaaaggacctttggcagcgatttcacCCTTGgatattcttgggtatgacactacaagtttggcacacctgtatttcgggagtttcccccattcatctctgtagatcctctcaagctctgtcaggttggatggggagcgtcgctgcacagctattttcaggtctctccagagatgttcgattgggttcaagtccaggctctggctgggccactcaaggacattcagagac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU103734 lncRNA downstream 33448 83348259 ~ 83348487 (-) True G94111
TU103730 lncRNA downstream 41424 83340292 ~ 83340511 (-) True G94107
TU103727 lncRNA downstream 58963 83322726 ~ 83322972 (-) True G94104
TU103725 lncRNA downstream 59426 83319901 ~ 83322509 (-) True G94102
TU103674 lncRNA downstream 74767 83307090 ~ 83307168 (-) True LOC110530648
TU103722 lncRNA upstream 4802 83386983 ~ 83391811 (-) True LOC110530724
TU103809 lncRNA upstream 71799 83453980 ~ 83480125 (-) True G94180
TU103835 lncRNA upstream 112815 83494996 ~ 83495230 (-) True G94206
TU103837 lncRNA upstream 113897 83496078 ~ 83496284 (-) True G94208
TU103820 lncRNA upstream 117090 83499271 ~ 83499488 (-) True G94191
XM_036986952.1 mRNA downstream 7312 83272529 ~ 83374623 (-) False LOC110530648
XM_036986957.1 mRNA downstream 7312 83272529 ~ 83374623 (-) False LOC110530648
XM_036986964.1 mRNA downstream 7312 83272529 ~ 83374623 (-) False LOC110530648
XM_036986961.1 mRNA downstream 7312 83274840 ~ 83374623 (-) False LOC110530648
XM_036986908.1 mRNA downstream 114772 82955265 ~ 83267163 (-) False LOC100301648
XM_021613988.2 mRNA upstream 4816 83386997 ~ 83409085 (-) False LOC110530724
XM_021613980.2 mRNA upstream 4816 83386997 ~ 83409299 (-) False LOC110530724
XM_036987024.1 mRNA upstream 6257 83388438 ~ 83409300 (-) False LOC110530724
XM_036987115.1 mRNA upstream 293883 83676064 ~ 83701456 (-) True LOC110532793
XM_036987195.1 mRNA upstream 331171 83713352 ~ 83718497 (-) False LOC110530770
TU103453 other downstream 420613 82949614 ~ 82961322 (-) False LOC100301648
TU103475 other downstream 420613 82949614 ~ 82961322 (-) False LOC100301648
TU103482 other downstream 420613 82949614 ~ 82961322 (-) True LOC100301648
TU102047 other downstream 1080088 82295312 ~ 82301847 (-) True LOC110532782
TU102078 other downstream 1087632 82293813 ~ 82294303 (-) False LOC110532782
TU103830 other upstream 101875 83484056 ~ 83485937 (-) True G94201
TU104323 other upstream 419151 83801332 ~ 83802471 (-) True G94613
TU104308 other upstream 776642 84158823 ~ 84160764 (-) False LOC110531033
TU104309 other upstream 776642 84158823 ~ 84160764 (-) True LOC110531033
TU104557 other upstream 821306 84203487 ~ 84204464 (-) True G94821

Expression Profile