RNA id: TU107444



Basic Information


Item Value
RNA id TU107444
length 250
lncRNA type read_through
GC content 0.36
exon number 3
gene id G97224
representative False

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 86466092 ~ 86538953 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATTGGAGTTACCATACATTATGGGTCAGCTAGGACTCAGGTATGGAGTTACCTTACATTATGGGTCAGCTAGGACTCAGGTATGGAGGTAACATACATTATGGGTCAGCTAGAACTCAGGTATGGAGGTAACATACAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU107393 lncRNA downstream 46075 86419765 ~ 86420017 (-) True G97191
TU107379 lncRNA downstream 48128 86417131 ~ 86417964 (-) True G97178
TU107378 lncRNA downstream 48319 86417131 ~ 86417773 (-) False G97178
TU107376 lncRNA downstream 55690 86395905 ~ 86410402 (-) True G97177
TU107359 lncRNA downstream 120716 86344207 ~ 86345376 (-) True G97163
TU107462 lncRNA upstream 13717 86552470 ~ 86552902 (-) True G97228
TU107459 lncRNA upstream 14303 86553056 ~ 86595186 (-) False G97227
TU107461 lncRNA upstream 14303 86553056 ~ 86596907 (-) False G97227
TU107429 lncRNA upstream 33416 86572169 ~ 86572869 (-) True G97210
TU107502 lncRNA upstream 34188 86572941 ~ 86575969 (-) False G97255
XM_036987786.1 mRNA downstream 63928 86353680 ~ 86402164 (-) True LOC110532855
XM_036987797.1 mRNA downstream 116322 86299040 ~ 86349770 (-) True LOC110531245
XM_036987774.1 mRNA downstream 178575 86235239 ~ 86287517 (-) True LOC110531234
XM_036987761.1 mRNA downstream 242140 86222196 ~ 86223952 (-) True LOC110513354
XM_036987696.1 mRNA downstream 418916 85892523 ~ 86047176 (-) True LOC110531925
XM_036987939.1 mRNA upstream 63569 86602322 ~ 86650143 (-) False LOC118966040
XM_036987922.1 mRNA upstream 63569 86602322 ~ 86650146 (-) False LOC118966040
XM_036987937.1 mRNA upstream 63569 86602322 ~ 86650167 (-) False LOC118966040
XM_036987927.1 mRNA upstream 64554 86603307 ~ 86650148 (-) True LOC118966040
XM_036987911.1 mRNA upstream 124762 86663515 ~ 86698225 (-) False LOC118936335
TU107372 other downstream 73003 86392561 ~ 86393089 (-) True G97176
TU107204 other downstream 314753 86146009 ~ 86151339 (-) False G97047
TU105927 other downstream 1114326 85346858 ~ 85351766 (-) False G96002
TU105929 other downstream 1114326 85346858 ~ 85351766 (-) True G96002
TU105902 other downstream 1205560 85258396 ~ 85260532 (-) True LOC110510598
TU107498 other upstream 27724 86566477 ~ 86623311 (-) True G97251
TU107596 other upstream 248304 86787057 ~ 86788052 (-) True G97308
TU107871 other upstream 755604 87294357 ~ 87294999 (-) True G97535
TU108928 other upstream 1374549 87913302 ~ 87915900 (-) False LOC110531505
TU109033 other upstream 1524709 88063462 ~ 88064854 (-) False pex13

Expression Profile