RNA id: TU113856



Basic Information


Item Value
RNA id TU113856
length 233
lncRNA type inter_gene
GC content 0.34
exon number 2
gene id G102039
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 92533731 ~ 92541756 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cacatttacagatgaacacattaacacatttacagatgaacacatttacagatgaacacatttacagatgaacacattaacacatttacagatgaacacatttacagatgaacacatttacagatgaacacatttacagatgaacacatgtacagatgaacacatttacagatgaacacatttacagatgaacacatttacagatgaacacatttacagatgaacacatttac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113810 lncRNA downstream 1908 92527019 ~ 92531823 (-) False G102006
TU113811 lncRNA downstream 1908 92527019 ~ 92531823 (-) False G102006
TU113809 lncRNA downstream 1908 92531235 ~ 92531823 (-) True G102006
TU113829 lncRNA downstream 21518 92511792 ~ 92512213 (-) True G102022
TU113827 lncRNA downstream 26178 92507297 ~ 92507553 (-) True G102020
TU113885 lncRNA upstream 32531 92574287 ~ 92627131 (-) True G102052
TU113891 lncRNA upstream 47700 92589456 ~ 92589987 (-) True G102058
TU113917 lncRNA upstream 94841 92636597 ~ 92636926 (-) True G102082
TU113925 lncRNA upstream 100311 92642067 ~ 92642966 (-) False G102087
TU113924 lncRNA upstream 100530 92642286 ~ 92642966 (-) True G102087
XM_036988702.1 mRNA downstream 701352 91793618 ~ 91832379 (-) False LOC110531398
XM_036988692.1 mRNA downstream 1003284 91317168 ~ 91530447 (-) False LOC118966091
XM_036988676.1 mRNA downstream 1003285 91317168 ~ 91530446 (-) False LOC118966091
XM_036990088.1 mRNA upstream 2133 92543889 ~ 92544887 (-) True LOC118966740
XM_036990094.1 mRNA upstream 75300 92617056 ~ 92622002 (-) True LOC118966741
XM_036990098.1 mRNA upstream 305708 92847464 ~ 92848944 (-) True LOC118966742
XM_036988731.1 mRNA upstream 307284 92849040 ~ 92850414 (-) False LOC118966095
XM_036988734.1 mRNA upstream 307396 92849152 ~ 92850414 (-) False LOC118966095
TU112492 other downstream 736286 91792579 ~ 91797445 (-) True LOC110531398
TU111909 other downstream 1299943 91232740 ~ 91233788 (-) True G100582
TU111641 other downstream 1548562 90982735 ~ 90985169 (-) True LOC110516041
TU111298 other downstream 1677165 90803445 ~ 90856566 (-) False G100197
TU113894 other upstream 49825 92591581 ~ 92595514 (-) True G102060
TU113918 other upstream 95542 92637298 ~ 92638881 (-) True G102083
TU113974 other upstream 197257 92739013 ~ 92739530 (-) True G102119
TU114032 other upstream 331813 92873569 ~ 92874498 (-) True G102158
TU113838 other upstream 354725 92896481 ~ 93019288 (-) False LOC110528622

Expression Profile