RNA id: TU113925



Basic Information


Item Value
RNA id TU113925
length 332
lncRNA type inter_gene
GC content 0.37
exon number 2
gene id G102087
representative False

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 92642067 ~ 92642966 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACACAGTGCTACATCACTAATGGGACTGACACACAACCTGACAATGGCTTACACGTGTGTTACACACTTCATAACTAGATAGAGTTAGATGTCAGACCATGTTAGACACATCATAACTAGATAGAGTTAGATACCAGACCATGTTAGACACATCATAACTAGATAGAGTTAGATGTCAGACCATGTTACACACTTCATAACTAGATAGTTAGATGTCAGACCATGTTAGACACTTCATAACTAGATAGAGTTAGATGTCAGACCATGTTAGACACTTCATAACTAGATAGAGTTAGATATCAGACCATGTTAGACACATCATAACTAGATAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113917 lncRNA downstream 5141 92636597 ~ 92636926 (-) True G102082
TU113885 lncRNA downstream 14936 92574287 ~ 92627131 (-) True G102052
TU113891 lncRNA downstream 52080 92589456 ~ 92589987 (-) True G102058
TU113856 lncRNA downstream 100311 92533731 ~ 92541756 (-) True G102039
TU113857 lncRNA downstream 106953 92534055 ~ 92535114 (-) True G102040
TU113933 lncRNA upstream 29149 92672115 ~ 92672379 (-) True G102095
TU113934 lncRNA upstream 29684 92672650 ~ 92672869 (-) True G102096
TU113941 lncRNA upstream 38198 92681164 ~ 92686808 (-) True G102100
TU113943 lncRNA upstream 44864 92687830 ~ 92688055 (-) True G102102
TU113962 lncRNA upstream 78343 92721309 ~ 92721519 (-) True G102111
XM_036990094.1 mRNA downstream 20065 92617056 ~ 92622002 (-) True LOC118966741
XM_036990088.1 mRNA downstream 97180 92543889 ~ 92544887 (-) True LOC118966740
XM_036988702.1 mRNA downstream 809688 91793618 ~ 91832379 (-) False LOC110531398
XM_036988692.1 mRNA downstream 1111620 91317168 ~ 91530447 (-) False LOC118966091
XM_036988689.1 mRNA downstream 1111621 91317168 ~ 91530446 (-) False LOC118966091
XM_036990098.1 mRNA upstream 204498 92847464 ~ 92848944 (-) True LOC118966742
XM_036988731.1 mRNA upstream 206074 92849040 ~ 92850414 (-) False LOC118966095
XM_036988734.1 mRNA upstream 206186 92849152 ~ 92850414 (-) False LOC118966095
XM_036988727.1 mRNA upstream 206203 92849169 ~ 92850460 (-) True LOC118966095
XM_036988780.1 mRNA upstream 225636 92868602 ~ 92906174 (-) False LOC110528622
TU113918 other downstream 3186 92637298 ~ 92638881 (-) True G102083
TU113894 other downstream 46553 92591581 ~ 92595514 (-) True G102060
TU112492 other downstream 844622 91792579 ~ 91797445 (-) True LOC110531398
TU111909 other downstream 1408279 91232740 ~ 91233788 (-) True G100582
TU111641 other downstream 1656898 90982735 ~ 90985169 (-) True LOC110516041
TU113974 other upstream 96047 92739013 ~ 92739530 (-) True G102119
TU114032 other upstream 230603 92873569 ~ 92874498 (-) True G102158
TU113838 other upstream 253515 92896481 ~ 93019288 (-) False LOC110528622
TU113839 other upstream 253515 92896481 ~ 92939885 (-) False LOC110528622
TU113840 other upstream 253515 92896481 ~ 92906045 (-) False LOC110528622

Expression Profile