RNA id: TU113974


Basic Information

Item Value
RNA id TU113974
length 518
RNA type TUCP
GC content 0.44
exon number 1
gene id G102119
representative True

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 92739013 ~ 92739530 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

atatacagggggtactggtacagagtcaatgtggaggctatatacagggggtaccggtacatagtcaatgtggagactatatacagggggtaccgatacatagtcaatgtggagactatatacagggggtaccggtacatagtcaatgtggagactatatacagggggtaccggtacagagtcaatgtggagactatatacagggggtaccggtacagagtcaatgtggaggctatatacaggggctactggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggagactatatacagggggtaccggtacagagtcaatgtggagactatatacagggggtaccagtacagagtcaatgtggagactatatacagggggtaccagtacagagtcaatgtggagactatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggagactatatacagggg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU113973 lncRNA downstream 68 92738639 ~ 92738945 (-) True G102118
TU113972 lncRNA downstream 796 92737871 ~ 92738217 (-) True G102117
TU113968 lncRNA downstream 7519 92731098 ~ 92731494 (-) True G102113
TU113962 lncRNA downstream 17494 92721309 ~ 92721519 (-) True G102111
TU113943 lncRNA downstream 50958 92687830 ~ 92688055 (-) True G102102
TU113978 lncRNA upstream 11333 92750863 ~ 92751069 (-) True G102123
TU113982 lncRNA upstream 28592 92768122 ~ 92768915 (-) True G102126
TU113988 lncRNA upstream 49065 92788595 ~ 92788846 (-) True G102132
TU113989 lncRNA upstream 49511 92789041 ~ 92789364 (-) True G102133
TU113995 lncRNA upstream 60553 92800083 ~ 92800287 (-) True G102138
XM_036990094.1 mRNA downstream 117011 92617056 ~ 92622002 (-) True LOC118966741
XM_036990088.1 mRNA downstream 194126 92543889 ~ 92544887 (-) True LOC118966740
XM_036988702.1 mRNA downstream 906634 91793618 ~ 91832379 (-) False LOC110531398
XM_036988692.1 mRNA downstream 1208566 91317168 ~ 91530447 (-) False LOC118966091
XM_036988689.1 mRNA downstream 1208567 91317168 ~ 91530446 (-) False LOC118966091
XM_036990098.1 mRNA upstream 107934 92847464 ~ 92848944 (-) True LOC118966742
XM_036988731.1 mRNA upstream 109510 92849040 ~ 92850414 (-) False LOC118966095
XM_036988734.1 mRNA upstream 109622 92849152 ~ 92850414 (-) False LOC118966095
XM_036988727.1 mRNA upstream 109639 92849169 ~ 92850460 (-) True LOC118966095
XM_036988780.1 mRNA upstream 129072 92868602 ~ 92906174 (-) False LOC110528622
TU113918 other downstream 100132 92637298 ~ 92638881 (-) True G102083
TU113894 other downstream 143499 92591581 ~ 92595514 (-) True G102060
TU112492 other downstream 941568 91792579 ~ 91797445 (-) True LOC110531398
TU111909 other downstream 1505225 91232740 ~ 91233788 (-) True G100582
TU111641 other downstream 1753844 90982735 ~ 90985169 (-) True LOC110516041
TU114032 other upstream 134039 92873569 ~ 92874498 (-) True G102158
TU113838 other upstream 156951 92896481 ~ 93019288 (-) False LOC110528622
TU113839 other upstream 156951 92896481 ~ 92939885 (-) False LOC110528622
TU113840 other upstream 156951 92896481 ~ 92906045 (-) False LOC110528622
TU113841 other upstream 156951 92896481 ~ 93003971 (-) False LOC110528622

Expression Profile