RNA id: TU114032


Basic Information

Item Value
RNA id TU114032
length 759
RNA type TUCP
GC content 0.40
exon number 2
gene id G102158
representative True

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 92873569 ~ 92874498 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

agggagttgtacctgtctgacatggtggtaatgcctgtactgtggtggacagggagttgtacctgtctgacatggtggtaatgcctgtactgtggtggacagggagttgtacctgtctgacatggtggtaatgcctgtactgtgtactgtggtggacaggaagttgtacctgtctgacatggtggtaatgcctgtactgtggtggacagggagttgtacctgtctgacatggtggtaatgcctgtactgtggtggacagggagttgtacctgtctgacatggtggtaatgcctgtactgtggtggacagggagttgtacctgtctgacatggtggtaatgcctgtactgtggtggacagggagttgtacctgtctgacatggtggtaatgcctgtactgtgtactgtggtggacagggagttgtacctgtctgacatggtggtaatgcctgtactgtgtactgtggtgtacaggaagttgtacctgtctgacatggtggtaatgcctgtactgtgtactgtggtggacaggaagttgtacctgtctgacatggtggtaatgcctgtactgtgtactgtggtggacagggagttgtacctgtctgacatggtggtaatgcctgtactgtgtactgtggtgtacagggagttgtacctgtctgacatggtggtaatgcctgtactgtgtactgtggtggacagggagttgtacctgtctgacatggtggtaatgcctgtactgtgtactgtggtggacagg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU114001 lncRNA downstream 53696 92819300 ~ 92819873 (-) True G102143
TU113995 lncRNA downstream 73282 92800083 ~ 92800287 (-) True G102138
TU113989 lncRNA downstream 84205 92789041 ~ 92789364 (-) True G102133
TU113988 lncRNA downstream 84723 92788595 ~ 92788846 (-) True G102132
TU113982 lncRNA downstream 104654 92768122 ~ 92768915 (-) True G102126
TU114036 lncRNA upstream 10262 92884760 ~ 92885362 (-) True G102161
TU114042 lncRNA upstream 40814 92915312 ~ 92915910 (-) True G102167
TU114047 lncRNA upstream 56695 92931193 ~ 92931461 (-) True G102172
TU114052 lncRNA upstream 66224 92940722 ~ 92941254 (-) False G102174
TU114053 lncRNA upstream 66224 92940722 ~ 92941254 (-) True G102174
XM_036988727.1 mRNA downstream 23109 92849169 ~ 92850460 (-) True LOC118966095
XM_036988731.1 mRNA downstream 23155 92849040 ~ 92850414 (-) False LOC118966095
XM_036988734.1 mRNA downstream 23155 92849152 ~ 92850414 (-) False LOC118966095
XM_036990098.1 mRNA downstream 24625 92847464 ~ 92848944 (-) True LOC118966742
XM_036990094.1 mRNA downstream 251567 92617056 ~ 92622002 (-) True LOC118966741
XM_021592264.2 mRNA upstream 241195 93115693 ~ 93117920 (-) True LOC110511284
XM_036990103.1 mRNA upstream 307907 93182405 ~ 93710353 (-) False LOC110513667
XM_036988872.1 mRNA upstream 1165742 94040240 ~ 94054157 (-) True LOC110515886
XM_036988933.1 mRNA upstream 1338036 94212534 ~ 94217907 (-) False LOC118966114
XR_005053367.1 mRNA upstream 1338036 94212534 ~ 94217907 (-) False LOC118966114
TU113974 other downstream 134039 92739013 ~ 92739530 (-) True G102119
TU113918 other downstream 234688 92637298 ~ 92638881 (-) True G102083
TU113894 other downstream 278055 92591581 ~ 92595514 (-) True G102060
TU112492 other downstream 1076124 91792579 ~ 91797445 (-) True LOC110531398
TU111909 other downstream 1639781 91232740 ~ 91233788 (-) True G100582
TU113838 other upstream 21983 92896481 ~ 93019288 (-) False LOC110528622
TU113839 other upstream 21983 92896481 ~ 92939885 (-) False LOC110528622
TU113840 other upstream 21983 92896481 ~ 92906045 (-) False LOC110528622
TU113841 other upstream 21983 92896481 ~ 93003971 (-) False LOC110528622
TU113842 other upstream 21983 92896481 ~ 93003971 (-) True LOC110528622

Expression Profile