Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00000230 |
| length | 804 |
| RNA type | processed_transcript |
| GC content | 0.43 |
| exon number | 4 |
| gene id | XLOC_000126 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 10051763 ~ 10059496 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0070527 | platelet aggregation | biological_process |
| GO:0072378 | blood coagulation, fibrin clot formation | biological_process |
| GO:0030168 | platelet activation | biological_process |
| GO:0007596 | blood coagulation | biological_process |
| GO:0051258 | protein polymerization | biological_process |
| GO:0007155 | cell adhesion | biological_process |
| GO:0007160 | cell-matrix adhesion | biological_process |
| GO:0062023 | collagen-containing extracellular matrix | cellular_component |
| GO:0005577 | fibrinogen complex | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0005102 | signaling receptor binding | molecular_function |
| id | description |
|---|---|
| ko04610 | Complement and coagulation cascades |
| ko04611 | Platelet activation |
| ko04613 | Neutrophil extracellular trap formation |
| ko05171 | Coronavirus disease - COVID-19 |
| ko04147 | Exosome |
| ko00536 | Glycosaminoglycan binding proteins |
| id | description |
|---|---|
| ZDB-GENE-030131-9261 | Predicted to enable signaling receptor binding activity. Acts upstream of or within blood coagulation, fibrin clot formation. Predicted to be located in extracellular region. Predicted to be part of fibrinogen complex. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in liver and yolk syncytial layer. Human ortholog(s) of this gene implicated in cardiovascular system disease (multiple); congenital afibrinogenemia; and end stage renal disease. Orthologous to human FGB (fibrinogen beta chain). |
| ensembl_id | ENSDART00000134835 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00002811 | lncRNA | upstream | 99901 | 9946664 ~ 9951873 (+) | True | XLOC_000121 |
| TCONS_00000220 | lncRNA | upstream | 137144 | 9886955 ~ 9914630 (+) | False | XLOC_000120 |
| TCONS_00000214 | lncRNA | upstream | 766423 | 9277846 ~ 9285351 (+) | True | XLOC_000116 |
| TCONS_00000210 | lncRNA | upstream | 890299 | 9157376 ~ 9161475 (+) | True | XLOC_000113 |
| TCONS_00003033 | lncRNA | upstream | 896253 | 9154094 ~ 9155521 (+) | False | XLOC_000113 |
| TCONS_00003034 | lncRNA | downstream | 407273 | 10462044 ~ 10462882 (+) | True | XLOC_000135 |
| TCONS_00002812 | lncRNA | downstream | 562753 | 10617524 ~ 10617930 (+) | True | XLOC_000136 |
| TCONS_00003035 | lncRNA | downstream | 590493 | 10645264 ~ 10668028 (+) | True | XLOC_000137 |
| TCONS_00003036 | lncRNA | downstream | 590593 | 10645364 ~ 10680841 (+) | True | XLOC_000138 |
| TCONS_00000251 | lncRNA | downstream | 607541 | 10662312 ~ 10663525 (+) | True | XLOC_000139 |
| TCONS_00000227 | mRNA | upstream | 18661 | 10018466 ~ 10033113 (+) | False | XLOC_000125 |
| TCONS_00000226 | mRNA | upstream | 19466 | 10003193 ~ 10032308 (+) | False | XLOC_000125 |
| TCONS_00000228 | mRNA | upstream | 19466 | 10019653 ~ 10032308 (+) | True | XLOC_000125 |
| TCONS_00000225 | mRNA | upstream | 51398 | 9994813 ~ 10000376 (+) | True | XLOC_000124 |
| TCONS_00000224 | mRNA | upstream | 51413 | 9994811 ~ 10000361 (+) | False | XLOC_000124 |
| TCONS_00000234 | mRNA | downstream | 19572 | 10074343 ~ 10114016 (+) | False | XLOC_000127 |
| TCONS_00000235 | mRNA | downstream | 19830 | 10074601 ~ 10101227 (+) | False | XLOC_000127 |
| TCONS_00000237 | mRNA | downstream | 55432 | 10110203 ~ 10113235 (+) | False | XLOC_000127 |
| TCONS_00000238 | mRNA | downstream | 55446 | 10110217 ~ 10119029 (+) | False | XLOC_000127 |
| TCONS_00000239 | mRNA | downstream | 63684 | 10118455 ~ 10124192 (+) | True | XLOC_000127 |
| TCONS_00000213 | other | upstream | 830158 | 9218648 ~ 9221616 (+) | True | XLOC_000115 |
| TCONS_00000209 | other | upstream | 896253 | 9154993 ~ 9155521 (+) | False | XLOC_000113 |
| TCONS_00000208 | other | upstream | 896501 | 9154094 ~ 9155273 (+) | False | XLOC_000113 |
| TCONS_00000154 | other | upstream | 2987831 | 7063837 ~ 7063943 (+) | True | XLOC_000081 |
| TCONS_00000149 | other | upstream | 3263970 | 6787690 ~ 6787804 (+) | True | XLOC_000078 |
| TCONS_00000236 | other | downstream | 27707 | 10082478 ~ 10087525 (+) | False | XLOC_000127 |
| TCONS_00000245 | other | downstream | 263306 | 10318077 ~ 10323272 (+) | False | XLOC_000132 |
| TCONS_00000247 | other | downstream | 308949 | 10363720 ~ 10363851 (+) | True | XLOC_000133 |
| TCONS_00000253 | other | downstream | 629224 | 10683995 ~ 10696328 (+) | True | XLOC_000140 |
| TCONS_00000258 | other | downstream | 1325726 | 11380497 ~ 11380611 (+) | True | XLOC_000145 |
