RNA id: XM_036937349.1


Basic Information

Item Value
RNA id XM_036937349.1
length 1539
RNA type mRNA
GC content 0.45
exon number 9
gene id LOC110506813
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9315853 ~ 9321654 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ACACTCTGCCTGTACACAACACACCCACCTTTTGCACACGGATTTCATAACCTTTGACCAAGGGAAAGAGTTTGTCTGCCATGAAGTGGGTGCTTGTTACCATCTGCATTGCTGCATTGGCAGCTCTTTTGGGGCAAAGACTTCTTAAATTGAGTGAAATAGCCCTTGCCAACAGAGAAGTGCCTGTAAAACGCCTCCCCAACTGTCACCTATTAAAGAATATAGAATATGGAGCAGAGGACTTCACCATACTTCGAGATGGACTGGCCATCATAAGCACCGGCTTGAAATATCCTGGAATGCCCTCCTTCTCTGATGACCCAGGGAAGATCTATACCCTGGACCTGTTGGACCCCAGACTGATCCCTGTGGAGCTGACAATCAAAGGAGACCTGGACCGGGACTCCTTCAACCCCCATGGAATCAGTGTCTACATTGACGAGACAGATAAAACCATCTATCTGTTTGTTGTCAATCACCCTCAACATTACACGAGCCAGGTAGAGATCTTTCTATTTGTCGAAGAGGACAACACCATTGTGCACCTGAAAACTATAAAGCATGATCTCCTTCATAGTGTGAATGACATTGTGGCTGTGGGAGTGGAGAGCTTCTATGCCACCAACGATCACTCCTATCCCAGTGCAGTGCTACACATGCTGGCTGTGTTCCTGGGTCTACCCTGGGCCGACGTGGTTTACTACAGCCCTGGAGGAGTGAAGGCAGTGGGCGATGGCTTCCTATCTGCTAACGGCATCAACATGTCACCCGACAAAAGGTATCTATACGTGTCTGCTATTTTGGACCATGAGATTGCTGTTTTTGagataaagaaaaacaaagacttGGTACATGTCAAGTCTGTAGCCGTTGGGTCTCTCTGTGACAACATCGAGGTGGACCATGTAACAGGTGACCTATGGCTGGGTTGTCACCCTAATGGAGCAAAGGTAGCAGTATATGACCCTGAGGATCTACCTGGATCTGAGGTCATTAGGATTCAGGACATCCACTATGAGAAGCCAGTGGTGACTCAGGTCTATGCTGATGATGGCAGTGTGCTCATAGGATCCTCTGTAGCAGCTCCCTATGAAGGAAAGCTTCTCATAGGAACAGTCTACCACAAAGCCCTGGTCTGTGATCTGAAGTAGCCAATGATTCCTTCCAGACATCTGATTTCcaaagtctgtgtgtgtatatatagatgcAGTAATGACACTCAAACTGTATTGTTCTCAAAGTCTGTGCTGTTTCTGTATAGTACATCTTGTCTGGTGTAATATGATTGAAAAGTATAAATATTCCACATGGTTGCCACAATATAACACTGCAATTGCTGTGATGCATGGCATGTGTAATTATGTTAAATGATAAGAGGCCGTCTGCGCTCTTTTAAGTTCCTTAGTACTCAATAGTGTCTGTTCCAGGTGCGTAGGAGTCAAAATAAGAATACTGGAAAAGATGAGAGACCTGCACACTGTCGAAAATGGTGGACTATTTGTATTGATTAAACAGTTATATTTCATTATTTTACTTTGA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0004064 arylesterase activity molecular_function

KEGG:

id description
K01045 PON; arylesterase / paraoxonase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127458 lncRNA downstream 11052 9283895 ~ 9304801 (-) True G111703
TU127496 lncRNA downstream 39222 9274220 ~ 9276631 (-) False G111734
TU127497 lncRNA downstream 39222 9275051 ~ 9276631 (-) True G111734
TU127467 lncRNA downstream 57301 9256281 ~ 9258552 (-) True LOC110510828
TU127494 lncRNA downstream 76945 9238646 ~ 9238908 (-) True G111732
TU127463 lncRNA upstream 7469 9329123 ~ 9330126 (-) True G111706
TU127528 lncRNA upstream 50981 9372635 ~ 9372867 (-) True G111758
TU127550 lncRNA upstream 103579 9425233 ~ 9425519 (-) True G111777
TU127557 lncRNA upstream 106787 9428441 ~ 9428663 (-) True G111780
TU127558 lncRNA upstream 107488 9429142 ~ 9429354 (-) True G111781
XM_036961584.1 mRNA downstream 13438 9284288 ~ 9302415 (-) True LOC118944050
XM_036937291.1 mRNA downstream 31108 9245445 ~ 9284745 (-) False LOC110510828
XM_036937298.1 mRNA downstream 31108 9245445 ~ 9284745 (-) False LOC110510828
XM_036937301.1 mRNA downstream 31108 9245445 ~ 9284745 (-) False LOC110510828
XM_036937302.1 mRNA downstream 31108 9245445 ~ 9284745 (-) False LOC110510828
XM_036937356.1 mRNA upstream 1106 9322760 ~ 9328762 (-) True LOC118937655
XM_036937351.1 mRNA upstream 8617 9330271 ~ 9349305 (-) True LOC110520732
XM_036937361.1 mRNA upstream 71292 9392946 ~ 9403493 (-) True LOC110512181
XR_005034948.1 mRNA upstream 524876 9846530 ~ 9846857 (-) False LOC118937662
XM_036937466.1 mRNA upstream 588816 9910470 ~ 9913331 (-) False LOC110507310
TU127380 other downstream 247791 9067612 ~ 9068062 (-) True G111659
TU127371 other downstream 265055 9050289 ~ 9050798 (-) True G111650
TU127230 other downstream 543033 8771536 ~ 8772820 (-) True LOC110519098
TU127197 other downstream 579455 8705304 ~ 8736398 (-) True LOC110535184
TU126626 other downstream 793092 8522002 ~ 8522761 (-) True G111044
TU127651 other upstream 117708 9439362 ~ 9439938 (-) True G111855
TU127773 other upstream 312883 9634537 ~ 9635130 (-) True G111955
TU127893 other upstream 439646 9761300 ~ 9761665 (-) True G112066
TU127903 other upstream 457357 9779011 ~ 9780455 (-) True G112076
TU128303 other upstream 679076 10000730 ~ 10003643 (-) False LOC110493960

Expression Profile