RNA id: XM_036937396.1



Basic Information


Item Value
RNA id XM_036937396.1
length 1125
RNA type mRNA
GC content 0.54
exon number 2
gene id LOC118937659
representative False

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9773574 ~ 9776807 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACGTGTACAGGATGAACAGCAACGTGGACGTATGGACAGCAACAGGAACAGCAACATGTACGGTATGGACAGCAACCTGGacggtatggacagcaacgtgGACAGTATGGAAAGCAACGGGAACAGCAACATGTACGGTATGGACAGCAACCTGGACGGTATGGACAGCAACCTGGacggtatggacagcaacgtgGACAGTATGGAAAGCAACATGGACAGCAACGTGCACAGTATGGACAGCAACGtgcacggtatggacagcaacgtgcacggtatggacagcaacgtgcacggtatggacagcaacgtgGACCGTATGGAAAGCAACATGGACAGCAACGTGCACAGTATGGACAGCAACGtgcacggtatggacagcaacgtgcacggtatggacagcaacgtgAACAGCAACGTGGACAGCAACGTGGGCAGTATGGAAAGCAACGTGAACAGCAACATGCACGGTATGGACAGCAGCGtgcacggtatggacagcaacgtgGACAGTATGGAAAGCAACGTGAACAGCAACATGCACGGTATGGACAGCAGTGtgcacggtatggacagcaacgtgAACAGCAGCCTGTACAATATGGacagcaacgtgtacggtatgGACGGCAACATGGACGGTATGGACAGCAATGTGGACAGCAAGGTGTACAGTATGGACAGCAACCTGGacggtatggacagcaacgtgcacggtatggacagcaacgtgtacggtatggacagcaacgtgtacggtatAGACGGCAACATGGACGGTACGGACAGCAACGTGGACAGCAAGGTGTACGGTATGGACAGCAACCTGGACGGTATGGACAGCAACATGGACAGCAACGTGTACAGTGTGGACGGCAACGTGCACGGTATGGACGGCAACGTGCACGGTATGGACGGCAACGTGCACGGTATGGACGGCAACGTGCACGGTATGGACGGCAACGTGCACGGTATGGACGGCAACGTGCACGGTATGGACGGCAACGTGCACGGTATGGACGGCAACGTGAACAGCAACGTGGACAGTATGGACAGCAGCGTGCACGGTATAGACGGCAACGTGAACAGCAACATGTAGAGTATGGACAGCAACGTGGACAGTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU127838 lncRNA upstream 21234 9752104 ~ 9752340 (+) True G112013
TU127836 lncRNA upstream 26015 9747359 ~ 9747559 (+) True LOC110520736
TU127818 lncRNA upstream 33867 9725563 ~ 9739707 (+) True LOC110506952
TU127833 lncRNA upstream 48194 9725171 ~ 9725380 (+) True G112008
TU127823 lncRNA upstream 78897 9694367 ~ 9694677 (+) True G111998
TU127820 lncRNA downstream 6749 9783556 ~ 9784652 (+) True LOC110520735
TU127909 lncRNA downstream 13308 9790115 ~ 9790613 (+) True G112081
TU127910 lncRNA downstream 15802 9792609 ~ 9792883 (+) True G112082
TU127911 lncRNA downstream 24881 9801688 ~ 9805928 (+) True G112083
TU127912 lncRNA downstream 34778 9811585 ~ 9811944 (+) True G112084
XM_036937390.1 mRNA upstream 15673 9744866 ~ 9757901 (+) False LOC110520736
XM_036937386.1 mRNA upstream 30851 9701990 ~ 9742723 (+) False LOC110506952
XM_021586764.2 mRNA upstream 221930 9548702 ~ 9551644 (+) True LOC110506885
XM_036937374.1 mRNA upstream 291074 9445191 ~ 9482500 (+) False LOC110519250
XM_036937399.1 mRNA downstream 44323 9821130 ~ 9845619 (+) False LOC110520749
XM_036937401.1 mRNA downstream 44324 9821131 ~ 9845619 (+) True LOC110520749
XM_036937413.1 mRNA downstream 72327 9849134 ~ 9983302 (+) False LOC110507293
XM_036937415.1 mRNA downstream 93175 9869982 ~ 9983302 (+) False LOC110507293
XM_036937418.1 mRNA downstream 93176 9869983 ~ 9983302 (+) False LOC110507293
TU127811 other upstream 49703 9702040 ~ 9723871 (+) False LOC110506952
TU127567 other upstream 329533 9440309 ~ 9444041 (+) False G111788
TU127568 other upstream 329533 9440309 ~ 9444041 (+) False G111788
TU127569 other upstream 331808 9440309 ~ 9441766 (+) True G111788
TU127152 other upstream 441958 9330269 ~ 9331616 (+) True G111453
TU128663 other downstream 1034711 10811518 ~ 10826063 (+) False G112697
TU129356 other downstream 1463925 11240732 ~ 11243069 (+) False fbxo32
TU129360 other downstream 1484747 11261554 ~ 11273000 (+) False elovl4a
TU129361 other downstream 1484747 11261554 ~ 11272897 (+) True elovl4a
TU129492 other downstream 1638124 11414931 ~ 11415178 (+) True G113285

Expression Profile