Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036938002.1 |
| length | 1169 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 6 |
| gene id | echdc1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 11392942 ~ 11397308 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0003824 | catalytic activity | molecular_function |
| id | description |
|---|---|
| K18426 | ECHDC1; ethylmalonyl-CoA/methylmalonyl-CoA decarboxylase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU129488 | lncRNA | upstream | 1359 | 11390836 ~ 11391583 (+) | True | G113282 |
| TU129486 | lncRNA | upstream | 8556 | 11384098 ~ 11384386 (+) | True | G113281 |
| TU129482 | lncRNA | upstream | 13503 | 11379135 ~ 11379439 (+) | True | G113279 |
| TU129481 | lncRNA | upstream | 16782 | 11375950 ~ 11376160 (+) | True | G113278 |
| TU129443 | lncRNA | upstream | 19945 | 11371641 ~ 11372997 (+) | False | soga3a |
| TU129493 | lncRNA | downstream | 18200 | 11415508 ~ 11415786 (+) | True | G113286 |
| TU129516 | lncRNA | downstream | 24855 | 11422163 ~ 11422955 (+) | True | G113292 |
| TU129539 | lncRNA | downstream | 50294 | 11447602 ~ 11448392 (+) | False | G113305 |
| TU129540 | lncRNA | downstream | 50294 | 11447602 ~ 11448392 (+) | True | G113305 |
| TU129494 | lncRNA | downstream | 54063 | 11451371 ~ 11459325 (+) | False | LOC110510416 |
| XM_036937965.1 | mRNA | upstream | 19942 | 11328026 ~ 11373000 (+) | False | soga3a |
| XM_036937970.1 | mRNA | upstream | 19942 | 11328026 ~ 11373000 (+) | False | soga3a |
| XM_036937958.1 | mRNA | upstream | 19942 | 11328029 ~ 11373000 (+) | False | soga3a |
| XM_036937962.1 | mRNA | upstream | 19942 | 11328032 ~ 11373000 (+) | False | soga3a |
| XM_036937987.1 | mRNA | upstream | 68135 | 11307920 ~ 11324807 (+) | False | LOC110520740 |
| XM_036937994.1 | mRNA | downstream | 5635 | 11402943 ~ 11413713 (+) | True | fbxo43 |
| XM_036938029.1 | mRNA | downstream | 18898 | 11416206 ~ 11451916 (+) | False | LOC110510416 |
| XM_036938016.1 | mRNA | downstream | 18898 | 11416206 ~ 11458431 (+) | False | LOC110510416 |
| XM_036938019.1 | mRNA | downstream | 18898 | 11416206 ~ 11458431 (+) | False | LOC110510416 |
| XM_036938025.1 | mRNA | downstream | 18898 | 11416206 ~ 11458431 (+) | False | LOC110510416 |
| TU129360 | other | upstream | 119942 | 11261554 ~ 11273000 (+) | False | elovl4a |
| TU129361 | other | upstream | 120045 | 11261554 ~ 11272897 (+) | True | elovl4a |
| TU129356 | other | upstream | 149873 | 11240732 ~ 11243069 (+) | False | fbxo32 |
| TU128663 | other | upstream | 566879 | 10811518 ~ 10826063 (+) | False | G112697 |
| TU127846 | other | upstream | 1616491 | 9774203 ~ 9776451 (+) | True | LOC118937659 |
| TU129492 | other | downstream | 17623 | 11414931 ~ 11415178 (+) | True | G113285 |
| TU129561 | other | downstream | 80668 | 11477976 ~ 11482741 (+) | True | G113313 |
| TU129672 | other | downstream | 311295 | 11708603 ~ 11709777 (+) | True | G113396 |
| TU131040 | other | downstream | 1323100 | 12720408 ~ 12720693 (+) | True | G114243 |
| TU131041 | other | downstream | 1323422 | 12720730 ~ 12721315 (+) | True | G114244 |
