Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU131640 |
| length | 961 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 4 |
| gene id | LOC110507612 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 13324937 ~ 13330676 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU131599 | lncRNA | upstream | 23983 | 13303047 ~ 13304633 (+) | True | G114656 |
| TU131598 | lncRNA | upstream | 61054 | 13267344 ~ 13267562 (+) | True | G114655 |
| TU131596 | lncRNA | upstream | 62246 | 13266158 ~ 13266370 (+) | True | G114653 |
| TU131595 | lncRNA | upstream | 63009 | 13265328 ~ 13265607 (+) | True | G114652 |
| TU131591 | lncRNA | upstream | 68971 | 13259358 ~ 13259645 (+) | True | G114648 |
| TU131642 | lncRNA | downstream | 886 | 13330758 ~ 13332229 (+) | False | G114687 |
| TU131643 | lncRNA | downstream | 886 | 13330758 ~ 13332453 (+) | False | G114687 |
| TU131644 | lncRNA | downstream | 1507 | 13331379 ~ 13332453 (+) | True | G114687 |
| TU131652 | lncRNA | downstream | 9092 | 13338964 ~ 13340292 (+) | False | G114689 |
| TU131650 | lncRNA | downstream | 9689 | 13339561 ~ 13340292 (+) | False | G114689 |
| XM_036938340.1 | mRNA | upstream | 86761 | 13193145 ~ 13241855 (+) | False | LOC118936508 |
| XM_036938345.1 | mRNA | upstream | 86761 | 13193148 ~ 13241855 (+) | True | LOC118936508 |
| XM_036938285.1 | mRNA | upstream | 267310 | 13046879 ~ 13061306 (+) | False | LOC110507515 |
| XM_021587748.2 | mRNA | downstream | 53316 | 13383188 ~ 13387921 (+) | True | LOC110507631 |
| XM_036938495.1 | mRNA | downstream | 244625 | 13574497 ~ 13582605 (+) | True | LOC110517609 |
| XM_036938484.1 | mRNA | downstream | 254252 | 13584124 ~ 13601598 (+) | False | LOC110507693 |
| XM_036938477.1 | mRNA | downstream | 254263 | 13584135 ~ 13604148 (+) | True | LOC110507693 |
| XM_036938470.1 | mRNA | downstream | 274432 | 13604304 ~ 13623972 (+) | False | LOC110520769 |
| TU131145 | other | upstream | 363686 | 12949360 ~ 12964930 (+) | True | G114323 |
| TU131068 | other | upstream | 565789 | 12762232 ~ 12762827 (+) | True | G114263 |
| TU131041 | other | upstream | 607301 | 12720730 ~ 12721315 (+) | True | G114244 |
| TU131040 | other | upstream | 607923 | 12720408 ~ 12720693 (+) | True | G114243 |
| TU129672 | other | upstream | 1618839 | 11708603 ~ 11709777 (+) | True | G113396 |
| TU131856 | other | downstream | 292105 | 13621977 ~ 13623965 (+) | True | LOC110520769 |
| TU131892 | other | downstream | 371738 | 13701610 ~ 13709374 (+) | False | LOC110520780 |
| TU132139 | other | downstream | 631389 | 13961261 ~ 13962812 (+) | True | LOC110535330 |
| TU132281 | other | downstream | 812010 | 14141882 ~ 14144267 (+) | True | G115190 |
| TU132280 | other | downstream | 904642 | 14234514 ~ 14236854 (+) | True | G115189 |
