RNA id: XR_005035141.1



Basic Information


Item Value
RNA id XR_005035141.1
length 321
RNA type mRNA
GC content 0.48
exon number 3
gene id LOC118937746
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13613625 ~ 13614107 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CATGTGATTAGGTGTGCAGGACACATGTGATTAGGTGTACATGTGTACATGTGATTAGGTGTGTAGGACACGTGTGATTAGGTGTGCAGGACACGTGTGATTAGGTGTGCAGGACACATGTGATTAGGTGTGCAGGACACATGTGATTAGGTGTGCAGGACACATGTGATTAGGTGTACAGGTCACATGTGATTAGGTGTGCAGGTCACATGTGATTAGGTGTGCAGGTCACGTGTGATTAGGTGTGCAGGACACATGTGATTAGGTGTGCAGGACACGTGTGATTAGGTGTGCAGGACACATGTGATTAGGTGTGCAGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU131929 lncRNA downstream 48906 13564063 ~ 13564719 (-) True G114921
TU131928 lncRNA downstream 50125 13562853 ~ 13563500 (-) True G114920
TU131926 lncRNA downstream 52369 13560923 ~ 13561256 (-) True G114918
TU131924 lncRNA downstream 54127 13559284 ~ 13559498 (-) True G114916
TU131919 lncRNA downstream 54983 13505010 ~ 13558642 (-) False G114912
TU131931 lncRNA upstream 8687 13622794 ~ 13623972 (-) True G114923
TU131984 lncRNA upstream 9889 13623996 ~ 13624385 (-) True G114951
TU131957 lncRNA upstream 28770 13642877 ~ 13644538 (-) True G114935
TU131954 lncRNA upstream 36619 13650726 ~ 13651401 (-) False LOC118937748
TU131955 lncRNA upstream 36706 13650813 ~ 13651401 (-) False LOC118937748
XM_036938506.1 mRNA downstream 113327 13496599 ~ 13500298 (-) False LOC110534058
XM_036938437.1 mRNA downstream 159961 13405882 ~ 13453664 (-) False LOC118937745
XR_005035137.1 mRNA downstream 259990 13339565 ~ 13353635 (-) False LOC110507671
XM_036938366.1 mRNA downstream 288945 13250306 ~ 13324680 (-) False LOC110513400
XM_036938552.1 mRNA upstream 36699 13650806 ~ 13661629 (-) False LOC118937748
XM_036938559.1 mRNA upstream 36699 13650806 ~ 13661631 (-) False LOC118937748
XM_036962010.1 mRNA upstream 214172 13828279 ~ 13914373 (-) False LOC110535394
XM_036962016.1 mRNA upstream 214172 13828279 ~ 13914376 (-) True LOC110535394
XM_036962206.1 mRNA upstream 312074 13926181 ~ 13935276 (-) True LOC110534076
TU131946 other downstream 31019 13574535 ~ 13582606 (-) True G114928
TU131917 other downstream 113342 13494448 ~ 13500283 (-) True LOC110534058
TU131789 other downstream 281119 13330748 ~ 13332506 (-) False G114812
TU131790 other downstream 281119 13330748 ~ 13332506 (-) True G114812
TU131788 other downstream 281316 13330748 ~ 13332309 (-) False G114812
TU131953 other upstream 39795 13653902 ~ 13661591 (-) True LOC118937748
TU132581 other upstream 348078 13962185 ~ 13976561 (-) True G115431
TU132617 other upstream 443435 14057542 ~ 14060958 (-) True LOC110535427
TU132669 other upstream 609752 14223859 ~ 14224919 (-) True G115492
TU132791 other upstream 795659 14409766 ~ 14412176 (-) True LOC110535605

Expression Profile