Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU136007 |
| length | 674 |
| lncRNA type | sense_over |
| GC content | 0.50 |
| exon number | 4 |
| gene id | LOC110536431 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 18052505 ~ 18071232 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU135991 | lncRNA | upstream | 21774 | 18043863 ~ 18047744 (+) | True | LOC110536418 |
| TU136016 | lncRNA | upstream | 33300 | 18029843 ~ 18036218 (+) | True | G118123 |
| TU136017 | lncRNA | upstream | 34557 | 18034386 ~ 18034961 (+) | True | G118124 |
| TU136014 | lncRNA | upstream | 39809 | 18028616 ~ 18029709 (+) | True | G118122 |
| TU135986 | lncRNA | upstream | 64171 | 18005044 ~ 18005347 (+) | True | G118109 |
| TU136057 | lncRNA | downstream | 56566 | 18127656 ~ 18127977 (+) | True | G118161 |
| TU136079 | lncRNA | downstream | 84185 | 18155275 ~ 18155514 (+) | True | G118179 |
| TU136131 | lncRNA | downstream | 178620 | 18249710 ~ 18251198 (+) | True | G118221 |
| TU136132 | lncRNA | downstream | 180132 | 18251222 ~ 18251806 (+) | True | G118222 |
| TU136134 | lncRNA | downstream | 183341 | 18254431 ~ 18255774 (+) | True | G118223 |
| XM_036940059.1 | mRNA | upstream | 21603 | 18016795 ~ 18047915 (+) | False | LOC110536418 |
| XM_036940051.1 | mRNA | upstream | 21603 | 18016797 ~ 18047915 (+) | False | LOC110536418 |
| XM_036940041.1 | mRNA | upstream | 21603 | 18016799 ~ 18047915 (+) | False | LOC110536418 |
| XM_036939797.1 | mRNA | upstream | 537281 | 17523085 ~ 17532237 (+) | False | polr3c |
| XM_036940106.1 | mRNA | downstream | 5881 | 18076971 ~ 18086938 (+) | False | trim108 |
| XM_036940097.1 | mRNA | downstream | 5884 | 18076974 ~ 18086938 (+) | True | trim108 |
| XM_021622219.2 | mRNA | downstream | 19218 | 18090308 ~ 18094143 (+) | True | LOC110536448 |
| XR_002475489.2 | mRNA | downstream | 206571 | 18277661 ~ 18278953 (+) | False | LOC110536617 |
| XM_036940334.1 | mRNA | downstream | 233396 | 18304486 ~ 18343804 (+) | False | LOC110536604 |
| TU135495 | other | upstream | 611496 | 17455765 ~ 17458022 (+) | True | G117735 |
| TU135611 | other | upstream | 647858 | 17410632 ~ 17421660 (+) | False | LOC110520798 |
| TU135623 | other | upstream | 647858 | 17410632 ~ 17421660 (+) | False | LOC110520798 |
| TU135631 | other | upstream | 660231 | 17400013 ~ 17409287 (+) | False | LOC110520798 |
| TU135467 | other | upstream | 995817 | 17073201 ~ 17073701 (+) | True | G117714 |
| TU137226 | other | downstream | 386268 | 18457358 ~ 18476354 (+) | False | LOC110536658 |
| TU137225 | other | downstream | 405334 | 18476424 ~ 18477134 (+) | False | LOC110536658 |
| TU137398 | other | downstream | 562749 | 18633839 ~ 18636041 (+) | True | G119153 |
| TU137405 | other | downstream | 599423 | 18670513 ~ 18672320 (+) | True | G119160 |
| TU137542 | other | downstream | 888046 | 18959136 ~ 18961465 (+) | False | G119245 |
